Protein–RNA interactions for Protein: Q9CUB6

Otud1, OTU domain-containing protein 1, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud1Q9CUB6 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Otud1Q9CUB6 Gm7278-201ENSMUST00000119836 1401 ntBASIC10.42□□□□□ -0.74
Otud1Q9CUB6 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Otud1Q9CUB6 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Otud1Q9CUB6 Gm45496-201ENSMUST00000209918 2917 ntBASIC10.42□□□□□ -0.74
Otud1Q9CUB6 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Otud1Q9CUB6 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Otud1Q9CUB6 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Otud1Q9CUB6 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Otud1Q9CUB6 Gm25053-201ENSMUST00000103982 133 ntBASIC10.42□□□□□ -0.74
Otud1Q9CUB6 Gm25922-201ENSMUST00000104281 130 ntBASIC10.42□□□□□ -0.74
Otud1Q9CUB6 Gm11380-201ENSMUST00000118067 560 ntBASIC10.42□□□□□ -0.74
Otud1Q9CUB6 Apoc3-202ENSMUST00000118649 453 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
Otud1Q9CUB6 Gm13445-201ENSMUST00000121664 307 ntBASIC10.42□□□□□ -0.74
Otud1Q9CUB6 Gm12705-201ENSMUST00000129460 872 ntTSL 2 BASIC10.42□□□□□ -0.74
Otud1Q9CUB6 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Otud1Q9CUB6 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC10.42□□□□□ -0.74
Otud1Q9CUB6 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Otud1Q9CUB6 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC10.42□□□□□ -0.74
Otud1Q9CUB6 Gm23218-201ENSMUST00000158124 276 ntBASIC10.42□□□□□ -0.74
Otud1Q9CUB6 Gm24679-201ENSMUST00000158762 111 ntBASIC10.42□□□□□ -0.74
Otud1Q9CUB6 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Otud1Q9CUB6 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC10.42□□□□□ -0.74
Otud1Q9CUB6 Gm22877-201ENSMUST00000175451 105 ntBASIC10.42□□□□□ -0.74
Otud1Q9CUB6 Gm26982-201ENSMUST00000182250 1151 ntBASIC10.42□□□□□ -0.74
Otud1Q9CUB6 Gm43055-201ENSMUST00000198859 879 ntTSL 3 BASIC10.42□□□□□ -0.74
Otud1Q9CUB6 Gm25053-202ENSMUST00000199731 132 ntBASIC10.42□□□□□ -0.74
Otud1Q9CUB6 Gm6439-201ENSMUST00000199849 862 ntBASIC10.42□□□□□ -0.74
Otud1Q9CUB6 Gm43912-201ENSMUST00000204352 538 ntBASIC10.42□□□□□ -0.74
Otud1Q9CUB6 A530053G22Rik-204ENSMUST00000204579 536 ntTSL 2 BASIC10.42□□□□□ -0.74
Otud1Q9CUB6 Gm44582-201ENSMUST00000209125 445 ntBASIC10.42□□□□□ -0.74
Otud1Q9CUB6 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC10.42□□□□□ -0.74
Otud1Q9CUB6 Gm9111-201ENSMUST00000219394 709 ntBASIC10.42□□□□□ -0.74
Otud1Q9CUB6 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Otud1Q9CUB6 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Otud1Q9CUB6 Tpbpb-201ENSMUST00000080766 850 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Otud1Q9CUB6 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Otud1Q9CUB6 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Otud1Q9CUB6 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Otud1Q9CUB6 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Otud1Q9CUB6 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Otud1Q9CUB6 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Otud1Q9CUB6 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC10.42□□□□□ -0.74
Otud1Q9CUB6 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Otud1Q9CUB6 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Otud1Q9CUB6 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Otud1Q9CUB6 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC10.42□□□□□ -0.74
Otud1Q9CUB6 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Otud1Q9CUB6 Fam222b-203ENSMUST00000155571 3358 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Otud1Q9CUB6 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Otud1Q9CUB6 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Otud1Q9CUB6 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Otud1Q9CUB6 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Otud1Q9CUB6 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Otud1Q9CUB6 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Otud1Q9CUB6 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Otud1Q9CUB6 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Otud1Q9CUB6 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC10.41□□□□□ -0.74
Otud1Q9CUB6 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Otud1Q9CUB6 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Otud1Q9CUB6 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Otud1Q9CUB6 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Otud1Q9CUB6 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Otud1Q9CUB6 1700071K01Rik-201ENSMUST00000117522 819 ntBASIC10.41□□□□□ -0.74
Otud1Q9CUB6 Mir1905-201ENSMUST00000122779 82 ntBASIC10.41□□□□□ -0.74
Otud1Q9CUB6 Hyal1-203ENSMUST00000123005 843 ntTSL 3 BASIC10.41□□□□□ -0.74
Otud1Q9CUB6 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Otud1Q9CUB6 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Otud1Q9CUB6 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Otud1Q9CUB6 A230006K03Rik-202ENSMUST00000154958 901 ntTSL 5 BASIC10.41□□□□□ -0.74
Otud1Q9CUB6 2610001J05Rik-202ENSMUST00000155856 1077 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Otud1Q9CUB6 Gm23776-201ENSMUST00000158993 325 ntBASIC10.41□□□□□ -0.74
Otud1Q9CUB6 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC10.41□□□□□ -0.74
Otud1Q9CUB6 Dusp3-207ENSMUST00000176261 496 ntTSL 3 BASIC10.41□□□□□ -0.74
Otud1Q9CUB6 Gm26763-201ENSMUST00000180968 1093 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Otud1Q9CUB6 Gm21139-201ENSMUST00000186594 877 ntBASIC10.41□□□□□ -0.74
Otud1Q9CUB6 Gm37337-201ENSMUST00000192601 993 ntBASIC10.41□□□□□ -0.74
Otud1Q9CUB6 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC10.41□□□□□ -0.74
Otud1Q9CUB6 Gm44681-201ENSMUST00000208447 842 ntBASIC10.41□□□□□ -0.74
Otud1Q9CUB6 Saa-ps-201ENSMUST00000211148 320 ntBASIC10.41□□□□□ -0.74
Otud1Q9CUB6 Gm9487-201ENSMUST00000216600 472 ntBASIC10.41□□□□□ -0.74
Otud1Q9CUB6 AC123694.1-201ENSMUST00000219525 644 ntTSL 5 BASIC10.41□□□□□ -0.74
Otud1Q9CUB6 AC159297.2-201ENSMUST00000219567 1075 ntBASIC10.41□□□□□ -0.74
Otud1Q9CUB6 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Otud1Q9CUB6 Wfdc12-201ENSMUST00000051272 775 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Otud1Q9CUB6 Anxa3-205ENSMUST00000198631 1523 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Otud1Q9CUB6 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC10.41□□□□□ -0.74
Otud1Q9CUB6 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Otud1Q9CUB6 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Otud1Q9CUB6 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Otud1Q9CUB6 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Otud1Q9CUB6 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Otud1Q9CUB6 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC10.41□□□□□ -0.74
Otud1Q9CUB6 Kdelc1-201ENSMUST00000027213 1765 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Otud1Q9CUB6 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Otud1Q9CUB6 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Otud1Q9CUB6 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Otud1Q9CUB6 2610028H24Rik-202ENSMUST00000105415 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Otud1Q9CUB6 Olfr1511-202ENSMUST00000214168 1468 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Otud1Q9CUB6 Gm45206-201ENSMUST00000206885 2285 ntBASIC10.41□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms