Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Gm45780-201ENSMUST00000212089 224 ntBASIC10.59□□□□□ -0.71
Cdh23Q99PF4 Mrgpra4-201ENSMUST00000087092 1259 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Cdh23Q99PF4 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cdh23Q99PF4 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC10.59□□□□□ -0.71
Cdh23Q99PF4 Bckdk-207ENSMUST00000206745 1702 ntTSL 5 BASIC10.59□□□□□ -0.71
Cdh23Q99PF4 Sox13-203ENSMUST00000144386 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cdh23Q99PF4 Clec10a-202ENSMUST00000102571 1496 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cdh23Q99PF4 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cdh23Q99PF4 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC10.59□□□□□ -0.71
Cdh23Q99PF4 Tcl1-201ENSMUST00000041316 1398 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cdh23Q99PF4 Serpina5-201ENSMUST00000021495 2162 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cdh23Q99PF4 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cdh23Q99PF4 Lrrc8dos-201ENSMUST00000135958 586 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Cdh23Q99PF4 Cnih3-203ENSMUST00000162685 602 ntTSL 5 BASIC10.59□□□□□ -0.71
Cdh23Q99PF4 Gm44709-201ENSMUST00000207649 448 ntTSL 5 BASIC10.59□□□□□ -0.71
Cdh23Q99PF4 Gm45521-201ENSMUST00000211339 676 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Cdh23Q99PF4 A930033M14Rik-201ENSMUST00000217206 400 ntBASIC10.59□□□□□ -0.71
Cdh23Q99PF4 Mir181c-201ENSMUST00000083549 89 ntBASIC10.59□□□□□ -0.71
Cdh23Q99PF4 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Cdh23Q99PF4 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdh23Q99PF4 Gm29590-201ENSMUST00000190396 1304 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Cdh23Q99PF4 Gm12221-201ENSMUST00000125096 1131 ntBASIC10.58□□□□□ -0.72
Cdh23Q99PF4 Gm16350-201ENSMUST00000162958 446 ntTSL 2 BASIC10.58□□□□□ -0.72
Cdh23Q99PF4 Gm17019-201ENSMUST00000167908 1162 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdh23Q99PF4 Tac1-203ENSMUST00000184986 691 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Cdh23Q99PF4 Polr1d-204ENSMUST00000200993 1167 ntTSL 5 BASIC10.58□□□□□ -0.72
Cdh23Q99PF4 Npm1-202ENSMUST00000093201 1192 ntTSL 5 BASIC10.58□□□□□ -0.72
Cdh23Q99PF4 Als2cr12-201ENSMUST00000055313 1540 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdh23Q99PF4 Casp14-201ENSMUST00000005488 2336 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdh23Q99PF4 Bbs7-201ENSMUST00000040148 2599 ntAPPRIS ALT1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdh23Q99PF4 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC10.58□□□□□ -0.72
Cdh23Q99PF4 Enpp3-203ENSMUST00000218044 1346 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Cdh23Q99PF4 Pcdhb10-201ENSMUST00000051126 2851 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Cdh23Q99PF4 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdh23Q99PF4 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdh23Q99PF4 Gm12376-201ENSMUST00000120538 607 ntBASIC10.58□□□□□ -0.72
Cdh23Q99PF4 Gm12224-201ENSMUST00000124047 567 ntTSL 2 BASIC10.58□□□□□ -0.72
Cdh23Q99PF4 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Cdh23Q99PF4 Gm14250-201ENSMUST00000148458 566 ntTSL 3 BASIC10.58□□□□□ -0.72
Cdh23Q99PF4 Gm8955-201ENSMUST00000182945 1008 ntBASIC10.58□□□□□ -0.72
Cdh23Q99PF4 Gm28609-201ENSMUST00000186515 463 ntTSL 3 BASIC10.58□□□□□ -0.72
Cdh23Q99PF4 AC155929.2-201ENSMUST00000218541 307 ntBASIC10.58□□□□□ -0.72
Cdh23Q99PF4 Gm1000-202ENSMUST00000222329 757 ntTSL 5 BASIC10.58□□□□□ -0.72
Cdh23Q99PF4 Tmem89-201ENSMUST00000026744 538 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdh23Q99PF4 Gm4883-201ENSMUST00000085702 528 ntBASIC10.58□□□□□ -0.72
Cdh23Q99PF4 Sh3bgrl2-204ENSMUST00000188241 3155 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Cdh23Q99PF4 Gm36638-202ENSMUST00000192073 2169 ntBASIC10.58□□□□□ -0.72
Cdh23Q99PF4 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdh23Q99PF4 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdh23Q99PF4 Gemin8-202ENSMUST00000087169 1928 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdh23Q99PF4 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Cdh23Q99PF4 Tmem41b-203ENSMUST00000119929 2346 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Cdh23Q99PF4 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdh23Q99PF4 Smok3a-201ENSMUST00000085886 2723 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdh23Q99PF4 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdh23Q99PF4 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdh23Q99PF4 Gm42589-201ENSMUST00000199097 1751 ntBASIC10.58□□□□□ -0.72
Cdh23Q99PF4 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
Cdh23Q99PF4 9130227L01Rik-202ENSMUST00000189293 1906 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Cdh23Q99PF4 Tnni2-201ENSMUST00000105971 732 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
Cdh23Q99PF4 Mrpl55-205ENSMUST00000108787 718 ntTSL 2 BASIC10.57□□□□□ -0.72
Cdh23Q99PF4 Mrps18b-202ENSMUST00000113782 803 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Cdh23Q99PF4 Gm14686-201ENSMUST00000119926 343 ntBASIC10.57□□□□□ -0.72
Cdh23Q99PF4 1700056N10Rik-201ENSMUST00000141875 1043 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Cdh23Q99PF4 Gm37362-201ENSMUST00000194567 634 ntTSL 5 BASIC10.57□□□□□ -0.72
Cdh23Q99PF4 Gm37643-201ENSMUST00000195369 1260 ntBASIC10.57□□□□□ -0.72
Cdh23Q99PF4 Gm45338-205ENSMUST00000210795 728 ntTSL 5 BASIC10.57□□□□□ -0.72
Cdh23Q99PF4 Gm11361-201ENSMUST00000223428 607 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Cdh23Q99PF4 AC154669.1-201ENSMUST00000224405 482 ntBASIC10.57□□□□□ -0.72
Cdh23Q99PF4 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdh23Q99PF4 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Cdh23Q99PF4 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdh23Q99PF4 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdh23Q99PF4 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdh23Q99PF4 Lrrc57-201ENSMUST00000102496 1848 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdh23Q99PF4 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdh23Q99PF4 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC10.57□□□□□ -0.72
Cdh23Q99PF4 Mthfd1l-203ENSMUST00000120585 3687 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdh23Q99PF4 Cct7-203ENSMUST00000204592 1544 ntTSL 5 BASIC10.57□□□□□ -0.72
Cdh23Q99PF4 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdh23Q99PF4 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdh23Q99PF4 Myl7-201ENSMUST00000102921 590 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdh23Q99PF4 Igkv4-55-201ENSMUST00000103359 379 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Cdh23Q99PF4 Gm25763-201ENSMUST00000104099 129 ntBASIC10.57□□□□□ -0.72
Cdh23Q99PF4 Gm15355-201ENSMUST00000118929 285 ntBASIC10.57□□□□□ -0.72
Cdh23Q99PF4 Ubl5-203ENSMUST00000160124 501 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
Cdh23Q99PF4 Gm25687-201ENSMUST00000175442 241 ntBASIC10.57□□□□□ -0.72
Cdh23Q99PF4 Gm26978-201ENSMUST00000182843 304 ntTSL 3 BASIC10.57□□□□□ -0.72
Cdh23Q99PF4 Gm8391-201ENSMUST00000185632 726 ntBASIC10.57□□□□□ -0.72
Cdh23Q99PF4 Gm18894-201ENSMUST00000198794 694 ntBASIC10.57□□□□□ -0.72
Cdh23Q99PF4 Magoh-201ENSMUST00000030348 692 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdh23Q99PF4 Olfr978-201ENSMUST00000057161 936 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Cdh23Q99PF4 n-R5s25-201ENSMUST00000082923 119 ntBASIC10.57□□□□□ -0.72
Cdh23Q99PF4 Sh2d6-201ENSMUST00000089687 1162 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Cdh23Q99PF4 Fanca-202ENSMUST00000118395 3274 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Cdh23Q99PF4 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdh23Q99PF4 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdh23Q99PF4 Anks1b-216ENSMUST00000182430 3305 ntTSL 5 BASIC10.57□□□□□ -0.72
Cdh23Q99PF4 Zcchc9-201ENSMUST00000022121 1541 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdh23Q99PF4 Gm10463-202ENSMUST00000195772 2889 ntBASIC10.57□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms