Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Mir194-2-201ENSMUST00000083648 86 ntBASIC12.56□□□□□ -0.4
Usp44Q8C2S0 Ppp1r32-201ENSMUST00000038842 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usp44Q8C2S0 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usp44Q8C2S0 Slfn1-201ENSMUST00000037994 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usp44Q8C2S0 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Usp44Q8C2S0 Spata5-201ENSMUST00000029277 2890 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usp44Q8C2S0 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Usp44Q8C2S0 Uimc1-204ENSMUST00000127195 2936 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Usp44Q8C2S0 Inpp4a-208ENSMUST00000137266 2934 ntTSL 5 BASIC12.56□□□□□ -0.4
Usp44Q8C2S0 Micalcl-203ENSMUST00000106645 2309 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Usp44Q8C2S0 Zfp474-201ENSMUST00000072666 1930 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usp44Q8C2S0 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usp44Q8C2S0 Tekt2-202ENSMUST00000102616 1542 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Usp44Q8C2S0 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Usp44Q8C2S0 Atg9a-205ENSMUST00000188347 4041 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Usp44Q8C2S0 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Usp44Q8C2S0 Tank-204ENSMUST00000112501 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usp44Q8C2S0 Lin54-210ENSMUST00000154921 3734 ntTSL 5 BASIC12.55□□□□□ -0.4
Usp44Q8C2S0 Ppef2-202ENSMUST00000201130 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp44Q8C2S0 Tpp2-201ENSMUST00000087933 4649 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Usp44Q8C2S0 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp44Q8C2S0 Specc1-214ENSMUST00000202389 3363 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Usp44Q8C2S0 Spert-201ENSMUST00000035243 1430 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp44Q8C2S0 Ttc1-201ENSMUST00000048578 1438 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp44Q8C2S0 Spaar-201ENSMUST00000131248 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp44Q8C2S0 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp44Q8C2S0 Lin54-209ENSMUST00000152387 2760 ntTSL 5 BASIC12.55□□□□□ -0.4
Usp44Q8C2S0 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp44Q8C2S0 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp44Q8C2S0 Gm45719-201ENSMUST00000207954 1662 ntBASIC12.55□□□□□ -0.4
Usp44Q8C2S0 Odf2l-202ENSMUST00000098538 2564 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Usp44Q8C2S0 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Usp44Q8C2S0 Pde4c-202ENSMUST00000110095 3290 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp44Q8C2S0 Gm19327-201ENSMUST00000220651 3271 ntBASIC12.55□□□□□ -0.4
Usp44Q8C2S0 Lep-201ENSMUST00000069789 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp44Q8C2S0 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Usp44Q8C2S0 Uaca-202ENSMUST00000214354 4417 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Usp44Q8C2S0 Gm6758-201ENSMUST00000119643 1055 ntBASIC12.55□□□□□ -0.4
Usp44Q8C2S0 Gm11824-201ENSMUST00000120191 846 ntBASIC12.55□□□□□ -0.4
Usp44Q8C2S0 Gm12688-201ENSMUST00000136525 701 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Usp44Q8C2S0 Gm4430-202ENSMUST00000193902 1041 ntBASIC12.55□□□□□ -0.4
Usp44Q8C2S0 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC12.55□□□□□ -0.4
Usp44Q8C2S0 Tmem238l-203ENSMUST00000211300 930 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
Usp44Q8C2S0 Gm31557-201ENSMUST00000213825 973 ntTSL 5 BASIC12.55□□□□□ -0.4
Usp44Q8C2S0 Gm31557-202ENSMUST00000213995 722 ntTSL 5 BASIC12.55□□□□□ -0.4
Usp44Q8C2S0 Gm46224-201ENSMUST00000220221 1242 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Usp44Q8C2S0 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp44Q8C2S0 AC140293.1-201ENSMUST00000225626 1247 ntBASIC12.55□□□□□ -0.4
Usp44Q8C2S0 AC154572.1-201ENSMUST00000226098 1204 ntBASIC12.55□□□□□ -0.4
Usp44Q8C2S0 Sorbs3-201ENSMUST00000022682 2914 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp44Q8C2S0 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Usp44Q8C2S0 Ppp1r17-201ENSMUST00000052827 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp44Q8C2S0 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp44Q8C2S0 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp44Q8C2S0 Gfi1b-204ENSMUST00000164290 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp44Q8C2S0 1700018A04Rik-204ENSMUST00000221561 2569 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Usp44Q8C2S0 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp44Q8C2S0 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.4
Usp44Q8C2S0 Myc-208ENSMUST00000191178 1362 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Usp44Q8C2S0 4930578C19Rik-201ENSMUST00000044188 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp44Q8C2S0 B630019A10Rik-201ENSMUST00000149488 2407 ntTSL 2 BASIC12.54□□□□□ -0.4
Usp44Q8C2S0 Olfr1349-207ENSMUST00000216447 2448 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Usp44Q8C2S0 Txk-203ENSMUST00000197313 2190 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Usp44Q8C2S0 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Usp44Q8C2S0 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usp44Q8C2S0 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Usp44Q8C2S0 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC12.54□□□□□ -0.4
Usp44Q8C2S0 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Usp44Q8C2S0 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Usp44Q8C2S0 Slc44a4-202ENSMUST00000169230 2246 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Usp44Q8C2S0 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
Usp44Q8C2S0 AC211878.3-201ENSMUST00000222629 2018 ntBASIC12.54□□□□□ -0.4
Usp44Q8C2S0 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usp44Q8C2S0 Slc25a44-202ENSMUST00000168755 3418 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Usp44Q8C2S0 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usp44Q8C2S0 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Usp44Q8C2S0 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usp44Q8C2S0 Mkrn2os-202ENSMUST00000112957 964 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Usp44Q8C2S0 Olfr29-ps1-201ENSMUST00000117959 963 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Usp44Q8C2S0 Lypla1-203ENSMUST00000119612 529 ntTSL 3 BASIC12.54□□□□□ -0.4
Usp44Q8C2S0 4921508D12Rik-201ENSMUST00000124095 1075 ntTSL 2 BASIC12.54□□□□□ -0.4
Usp44Q8C2S0 Gm13802-201ENSMUST00000150159 663 ntTSL 3 BASIC12.54□□□□□ -0.4
Usp44Q8C2S0 Gm8194-201ENSMUST00000159783 859 ntBASIC12.54□□□□□ -0.4
Usp44Q8C2S0 n-R5s130-201ENSMUST00000178128 119 ntBASIC12.54□□□□□ -0.4
Usp44Q8C2S0 Gm24312-201ENSMUST00000178677 119 ntBASIC12.54□□□□□ -0.4
Usp44Q8C2S0 n-R5s106-201ENSMUST00000179060 119 ntBASIC12.54□□□□□ -0.4
Usp44Q8C2S0 n-R5s118-201ENSMUST00000179887 119 ntBASIC12.54□□□□□ -0.4
Usp44Q8C2S0 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Usp44Q8C2S0 Gm34379-201ENSMUST00000195036 290 ntBASIC12.54□□□□□ -0.4
Usp44Q8C2S0 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Usp44Q8C2S0 Gm45120-201ENSMUST00000208880 408 ntBASIC12.54□□□□□ -0.4
Usp44Q8C2S0 AC163703.1-201ENSMUST00000214133 339 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Usp44Q8C2S0 Tctex1d1-201ENSMUST00000030248 977 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usp44Q8C2S0 Atp6v1e2-201ENSMUST00000065758 1005 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usp44Q8C2S0 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usp44Q8C2S0 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usp44Q8C2S0 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usp44Q8C2S0 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usp44Q8C2S0 Slc7a4-201ENSMUST00000063544 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usp44Q8C2S0 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms