Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Ank3-204ENSMUST00000092432 5832 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Trub1Q8C0D0 Srrm4-202ENSMUST00000139425 2798 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trub1Q8C0D0 Slc16a7-202ENSMUST00000105257 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trub1Q8C0D0 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Trub1Q8C0D0 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trub1Q8C0D0 Gm43622-201ENSMUST00000200140 2019 ntBASIC11.08□□□□□ -0.64
Trub1Q8C0D0 Gm32200-201ENSMUST00000192778 2385 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trub1Q8C0D0 Gm38273-201ENSMUST00000194987 2382 ntBASIC11.08□□□□□ -0.64
Trub1Q8C0D0 Gm16982-201ENSMUST00000181275 2620 ntTSL 2 BASIC11.07□□□□□ -0.64
Trub1Q8C0D0 Ccndbp1-202ENSMUST00000099488 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trub1Q8C0D0 Cryz-201ENSMUST00000029850 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trub1Q8C0D0 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Trub1Q8C0D0 Gm16429-202ENSMUST00000201400 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trub1Q8C0D0 Gm7971-201ENSMUST00000086950 1848 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Trub1Q8C0D0 Lin54-209ENSMUST00000152387 2760 ntTSL 5 BASIC11.07□□□□□ -0.64
Trub1Q8C0D0 Slc7a4-201ENSMUST00000063544 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trub1Q8C0D0 Zfp964-203ENSMUST00000204285 4333 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trub1Q8C0D0 C130083M11Rik-201ENSMUST00000197171 2072 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trub1Q8C0D0 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trub1Q8C0D0 Tsc22d4-202ENSMUST00000100539 3983 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trub1Q8C0D0 Golm1-201ENSMUST00000022039 3954 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trub1Q8C0D0 AC242690.1-202ENSMUST00000214616 1742 ntTSL 5 BASIC11.07□□□□□ -0.64
Trub1Q8C0D0 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC11.07□□□□□ -0.64
Trub1Q8C0D0 Klhdc10-206ENSMUST00000144272 1387 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trub1Q8C0D0 Bicd1-203ENSMUST00000111513 4049 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trub1Q8C0D0 Pemt-202ENSMUST00000102692 1003 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trub1Q8C0D0 Mkrn1-204ENSMUST00000114823 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trub1Q8C0D0 Gm14807-201ENSMUST00000116640 983 ntBASIC11.07□□□□□ -0.64
Trub1Q8C0D0 Gm6322-201ENSMUST00000118789 1004 ntBASIC11.07□□□□□ -0.64
Trub1Q8C0D0 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trub1Q8C0D0 Stk33-205ENSMUST00000141210 949 ntTSL 3 BASIC11.07□□□□□ -0.64
Trub1Q8C0D0 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trub1Q8C0D0 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trub1Q8C0D0 Gzmn-201ENSMUST00000015587 956 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trub1Q8C0D0 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trub1Q8C0D0 Gm42518-201ENSMUST00000196277 938 ntBASIC11.07□□□□□ -0.64
Trub1Q8C0D0 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC11.07□□□□□ -0.64
Trub1Q8C0D0 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC11.07□□□□□ -0.64
Trub1Q8C0D0 Capsl-202ENSMUST00000226688 739 ntBASIC11.07□□□□□ -0.64
Trub1Q8C0D0 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC11.07□□□□□ -0.64
Trub1Q8C0D0 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trub1Q8C0D0 Gm16380-201ENSMUST00000077997 478 ntBASIC11.07□□□□□ -0.64
Trub1Q8C0D0 Olfr700-201ENSMUST00000079936 951 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Trub1Q8C0D0 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trub1Q8C0D0 n-R5s185-201ENSMUST00000083953 119 ntBASIC11.07□□□□□ -0.64
Trub1Q8C0D0 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trub1Q8C0D0 Pml-202ENSMUST00000114136 4343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trub1Q8C0D0 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trub1Q8C0D0 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trub1Q8C0D0 Serpinb6a-203ENSMUST00000076532 1504 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Trub1Q8C0D0 Arvcf-203ENSMUST00000115612 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trub1Q8C0D0 Sirpa-201ENSMUST00000049262 3644 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trub1Q8C0D0 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trub1Q8C0D0 Prpf6-203ENSMUST00000136481 3048 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Trub1Q8C0D0 Tfap2b-204ENSMUST00000187754 3023 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trub1Q8C0D0 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trub1Q8C0D0 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Trub1Q8C0D0 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Trub1Q8C0D0 Eef1b2-204ENSMUST00000129339 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trub1Q8C0D0 Hepacam-201ENSMUST00000051839 3347 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trub1Q8C0D0 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Trub1Q8C0D0 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trub1Q8C0D0 Dnajc14-202ENSMUST00000217745 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trub1Q8C0D0 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trub1Q8C0D0 Ubap2l-215ENSMUST00000198322 3385 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trub1Q8C0D0 Ttpal-207ENSMUST00000171696 4522 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trub1Q8C0D0 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trub1Q8C0D0 Ppef2-202ENSMUST00000201130 2878 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trub1Q8C0D0 Sgk3-203ENSMUST00000168907 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trub1Q8C0D0 Pnpla6-201ENSMUST00000004681 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trub1Q8C0D0 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Trub1Q8C0D0 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC11.06□□□□□ -0.64
Trub1Q8C0D0 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC11.06□□□□□ -0.64
Trub1Q8C0D0 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trub1Q8C0D0 Ampd2-203ENSMUST00000102638 3650 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trub1Q8C0D0 Dhx34-202ENSMUST00000118795 4076 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Trub1Q8C0D0 Ankrd26-201ENSMUST00000112830 6930 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Trub1Q8C0D0 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trub1Q8C0D0 Fcrl1-202ENSMUST00000163661 1649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trub1Q8C0D0 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trub1Q8C0D0 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trub1Q8C0D0 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trub1Q8C0D0 Cyp2d41-ps-201ENSMUST00000180453 1503 ntBASIC11.06□□□□□ -0.64
Trub1Q8C0D0 Phf21a-205ENSMUST00000111291 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trub1Q8C0D0 Dlgap1-214ENSMUST00000155016 4712 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trub1Q8C0D0 Lingo1-201ENSMUST00000053568 3295 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trub1Q8C0D0 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Trub1Q8C0D0 Mir1901-201ENSMUST00000122616 78 ntBASIC11.06□□□□□ -0.64
Trub1Q8C0D0 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC11.06□□□□□ -0.64
Trub1Q8C0D0 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trub1Q8C0D0 Gm17798-201ENSMUST00000182282 1035 ntBASIC11.06□□□□□ -0.64
Trub1Q8C0D0 Gm7719-201ENSMUST00000182374 975 ntBASIC11.06□□□□□ -0.64
Trub1Q8C0D0 Mir6998-201ENSMUST00000183343 64 ntBASIC11.06□□□□□ -0.64
Trub1Q8C0D0 Gm18776-201ENSMUST00000188833 654 ntBASIC11.06□□□□□ -0.64
Trub1Q8C0D0 Gm8918-201ENSMUST00000190587 1087 ntBASIC11.06□□□□□ -0.64
Trub1Q8C0D0 A830092H15Rik-202ENSMUST00000195446 649 ntTSL 3 BASIC11.06□□□□□ -0.64
Trub1Q8C0D0 Gm34023-201ENSMUST00000195539 217 ntBASIC11.06□□□□□ -0.64
Trub1Q8C0D0 Fgfbp1-203ENSMUST00000199894 1228 ntAPPRIS P1 TSL 3 BASIC11.06□□□□□ -0.64
Trub1Q8C0D0 Gm42710-201ENSMUST00000200608 985 ntBASIC11.06□□□□□ -0.64
Trub1Q8C0D0 Gm3786-201ENSMUST00000202659 378 ntBASIC11.06□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms