Protein–RNA interactions for Protein: Q6P9L4

Usp49, Ubiquitin carboxyl-terminal hydrolase 49, mousemouse

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp49Q6P9L4 Slc22a14-204ENSMUST00000170400 2110 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Usp49Q6P9L4 Gm9574-201ENSMUST00000173127 845 ntBASIC12.03□□□□□ -0.48
Usp49Q6P9L4 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Usp49Q6P9L4 Gm18014-201ENSMUST00000183369 817 ntBASIC12.03□□□□□ -0.48
Usp49Q6P9L4 Gm7082-201ENSMUST00000209880 969 ntBASIC12.03□□□□□ -0.48
Usp49Q6P9L4 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Usp49Q6P9L4 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Usp49Q6P9L4 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC12.03□□□□□ -0.48
Usp49Q6P9L4 Gm46328-201ENSMUST00000217924 976 ntTSL 5 BASIC12.03□□□□□ -0.48
Usp49Q6P9L4 Gm19990-201ENSMUST00000219468 1224 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Usp49Q6P9L4 Olfr525-201ENSMUST00000078103 1050 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Usp49Q6P9L4 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Usp49Q6P9L4 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Usp49Q6P9L4 Zfp418-201ENSMUST00000051435 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Usp49Q6P9L4 Rnf20-201ENSMUST00000029989 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Usp49Q6P9L4 Bzw2-201ENSMUST00000020856 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Usp49Q6P9L4 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Usp49Q6P9L4 Ccdc62-202ENSMUST00000165148 3920 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Usp49Q6P9L4 Tnk2-204ENSMUST00000115123 4225 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Usp49Q6P9L4 Gpr68-201ENSMUST00000053668 3099 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Usp49Q6P9L4 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Usp49Q6P9L4 Baat-201ENSMUST00000043056 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Usp49Q6P9L4 Zfp474-201ENSMUST00000072666 1930 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Usp49Q6P9L4 Rpap2-201ENSMUST00000065422 2268 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Usp49Q6P9L4 Gm42587-201ENSMUST00000198462 1981 ntBASIC12.03□□□□□ -0.48
Usp49Q6P9L4 Ddr1-201ENSMUST00000003628 3802 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Usp49Q6P9L4 AC127597.1-201ENSMUST00000225697 5711 ntBASIC12.03□□□□□ -0.48
Usp49Q6P9L4 Gm43622-201ENSMUST00000200140 2019 ntBASIC12.03□□□□□ -0.48
Usp49Q6P9L4 Brcc3-203ENSMUST00000118428 2093 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Usp49Q6P9L4 Arhgap15os-201ENSMUST00000139948 1761 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Usp49Q6P9L4 Gad1-ps-201ENSMUST00000167243 1776 ntBASIC12.02□□□□□ -0.48
Usp49Q6P9L4 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Usp49Q6P9L4 Rgs12-204ENSMUST00000114281 3439 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Usp49Q6P9L4 Stau2-216ENSMUST00000162627 2773 ntTSL 5 BASIC12.02□□□□□ -0.48
Usp49Q6P9L4 Slc35c1-201ENSMUST00000067631 3139 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Usp49Q6P9L4 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Usp49Q6P9L4 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Usp49Q6P9L4 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Usp49Q6P9L4 Olfr272-202ENSMUST00000107667 1936 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
Usp49Q6P9L4 9430064I24Rik-201ENSMUST00000206516 2669 ntBASIC12.02□□□□□ -0.49
Usp49Q6P9L4 Gm17244-201ENSMUST00000192482 3416 ntBASIC12.02□□□□□ -0.49
Usp49Q6P9L4 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Usp49Q6P9L4 Gm6322-201ENSMUST00000118789 1004 ntBASIC12.02□□□□□ -0.49
Usp49Q6P9L4 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Usp49Q6P9L4 Stk33-205ENSMUST00000141210 949 ntTSL 3 BASIC12.02□□□□□ -0.49
Usp49Q6P9L4 Gng2-203ENSMUST00000159073 960 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Usp49Q6P9L4 Has2os-202ENSMUST00000163314 633 ntTSL 3 BASIC12.02□□□□□ -0.49
Usp49Q6P9L4 Pax4-202ENSMUST00000164519 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Usp49Q6P9L4 Pax4-203ENSMUST00000171089 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Usp49Q6P9L4 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Usp49Q6P9L4 Gm13290-201ENSMUST00000177806 968 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Usp49Q6P9L4 Mir7035-201ENSMUST00000184713 82 ntBASIC12.02□□□□□ -0.49
Usp49Q6P9L4 Gm8918-201ENSMUST00000190587 1087 ntBASIC12.02□□□□□ -0.49
Usp49Q6P9L4 Nme6-206ENSMUST00000197627 905 ntTSL 3 BASIC12.02□□□□□ -0.49
Usp49Q6P9L4 Gm3289-201ENSMUST00000200819 756 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Usp49Q6P9L4 Acy1-211ENSMUST00000216400 1030 ntTSL 5 BASIC12.02□□□□□ -0.49
Usp49Q6P9L4 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC12.02□□□□□ -0.49
Usp49Q6P9L4 AC154431.1-201ENSMUST00000224910 880 ntBASIC12.02□□□□□ -0.49
Usp49Q6P9L4 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Usp49Q6P9L4 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Usp49Q6P9L4 Lrrc49-204ENSMUST00000114034 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Usp49Q6P9L4 St5-201ENSMUST00000077909 4612 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
Usp49Q6P9L4 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Usp49Q6P9L4 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Usp49Q6P9L4 Gm5697-201ENSMUST00000122295 2482 ntBASIC12.02□□□□□ -0.49
Usp49Q6P9L4 Mymk-201ENSMUST00000009358 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Usp49Q6P9L4 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Usp49Q6P9L4 Tgfb1i1-201ENSMUST00000070656 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Usp49Q6P9L4 Lrrc57-201ENSMUST00000102496 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Usp49Q6P9L4 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Usp49Q6P9L4 Gm8122-201ENSMUST00000165988 1404 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Usp49Q6P9L4 Fbrs-201ENSMUST00000048896 2650 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.49
Usp49Q6P9L4 Vil1-201ENSMUST00000027366 3124 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Usp49Q6P9L4 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Usp49Q6P9L4 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Usp49Q6P9L4 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Usp49Q6P9L4 Il10ra-202ENSMUST00000176222 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Usp49Q6P9L4 Eef1b2-204ENSMUST00000129339 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Usp49Q6P9L4 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Usp49Q6P9L4 Tnfaip8-212ENSMUST00000179937 2385 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Usp49Q6P9L4 Pold1-201ENSMUST00000049343 3454 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Usp49Q6P9L4 Slc6a12-201ENSMUST00000032200 2644 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Usp49Q6P9L4 Zfp948-201ENSMUST00000088787 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Usp49Q6P9L4 Car12-202ENSMUST00000085420 3639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Usp49Q6P9L4 Zer1-201ENSMUST00000044751 4100 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Usp49Q6P9L4 Sgsm1-202ENSMUST00000057209 4339 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Usp49Q6P9L4 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC12.01□□□□□ -0.49
Usp49Q6P9L4 Mir1901-201ENSMUST00000122616 78 ntBASIC12.01□□□□□ -0.49
Usp49Q6P9L4 Platr12-201ENSMUST00000141027 462 ntTSL 3 BASIC12.01□□□□□ -0.49
Usp49Q6P9L4 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Usp49Q6P9L4 Gzmn-201ENSMUST00000015587 956 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Usp49Q6P9L4 Gm22379-201ENSMUST00000157480 131 ntBASIC12.01□□□□□ -0.49
Usp49Q6P9L4 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Usp49Q6P9L4 Gm5529-201ENSMUST00000165691 891 ntBASIC12.01□□□□□ -0.49
Usp49Q6P9L4 Gm25951-201ENSMUST00000175330 64 ntBASIC12.01□□□□□ -0.49
Usp49Q6P9L4 Gm16894-201ENSMUST00000181756 842 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Usp49Q6P9L4 Gm35584-201ENSMUST00000191767 641 ntTSL 5 BASIC12.01□□□□□ -0.49
Usp49Q6P9L4 Gm37028-201ENSMUST00000194276 107 ntBASIC12.01□□□□□ -0.49
Usp49Q6P9L4 Gm18466-201ENSMUST00000209147 499 ntBASIC12.01□□□□□ -0.49
Usp49Q6P9L4 Gm45258-201ENSMUST00000210042 853 ntBASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms