Protein–RNA interactions for Protein: Q00422

Gabpa, GA-binding protein alpha chain, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GabpaQ00422 Gm15540-201ENSMUST00000136052 674 ntTSL 2 BASIC12.21□□□□□ -0.45
GabpaQ00422 Gm25604-201ENSMUST00000158359 133 ntBASIC12.21□□□□□ -0.45
GabpaQ00422 Gm6686-201ENSMUST00000178455 258 ntBASIC12.21□□□□□ -0.45
GabpaQ00422 Milr1-206ENSMUST00000182896 918 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
GabpaQ00422 Milr1-207ENSMUST00000182908 811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
GabpaQ00422 Gm38038-201ENSMUST00000193803 259 ntBASIC12.21□□□□□ -0.45
GabpaQ00422 Gm18123-201ENSMUST00000210874 822 ntBASIC12.21□□□□□ -0.45
GabpaQ00422 Gm32786-201ENSMUST00000211351 628 ntTSL 3 BASIC12.21□□□□□ -0.45
GabpaQ00422 Gm18122-201ENSMUST00000211390 904 ntBASIC12.21□□□□□ -0.45
GabpaQ00422 Gm9619-201ENSMUST00000211587 762 ntBASIC12.21□□□□□ -0.45
GabpaQ00422 Gm9644-201ENSMUST00000212828 1183 ntBASIC12.21□□□□□ -0.45
GabpaQ00422 Gm40910-202ENSMUST00000223077 569 ntTSL 5 BASIC12.21□□□□□ -0.45
GabpaQ00422 AC129217.1-201ENSMUST00000225181 642 ntBASIC12.21□□□□□ -0.45
GabpaQ00422 Magoh-201ENSMUST00000030348 692 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
GabpaQ00422 Gm10233-201ENSMUST00000089275 628 ntBASIC12.21□□□□□ -0.45
GabpaQ00422 Gm10238-201ENSMUST00000089689 408 ntBASIC12.21□□□□□ -0.45
GabpaQ00422 Gemin8-203ENSMUST00000096252 1039 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
GabpaQ00422 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
GabpaQ00422 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
GabpaQ00422 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC12.21□□□□□ -0.45
GabpaQ00422 Acsbg1-201ENSMUST00000034822 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
GabpaQ00422 3000002C10Rik-201ENSMUST00000125451 1614 ntTSL 2 BASIC12.21□□□□□ -0.46
GabpaQ00422 Cdca8-202ENSMUST00000084296 1626 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
GabpaQ00422 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
GabpaQ00422 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC12.21□□□□□ -0.46
GabpaQ00422 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
GabpaQ00422 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
GabpaQ00422 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC12.21□□□□□ -0.46
GabpaQ00422 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC12.21□□□□□ -0.46
GabpaQ00422 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
GabpaQ00422 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
GabpaQ00422 Gm3372-201ENSMUST00000198806 1792 ntBASIC12.2□□□□□ -0.46
GabpaQ00422 Gm28624-201ENSMUST00000186430 2131 ntBASIC12.2□□□□□ -0.46
GabpaQ00422 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
GabpaQ00422 5730422E09Rik-201ENSMUST00000180733 1740 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
GabpaQ00422 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
GabpaQ00422 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
GabpaQ00422 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
GabpaQ00422 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
GabpaQ00422 Gm42941-201ENSMUST00000200347 1321 ntBASIC12.2□□□□□ -0.46
GabpaQ00422 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
GabpaQ00422 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
GabpaQ00422 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
GabpaQ00422 Dedd-202ENSMUST00000097467 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
GabpaQ00422 Cyp2j13-202ENSMUST00000097973 1648 ntTSL 5 BASIC12.2□□□□□ -0.46
GabpaQ00422 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
GabpaQ00422 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
GabpaQ00422 Ccin-201ENSMUST00000095107 1941 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
GabpaQ00422 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
GabpaQ00422 Ccdc32-203ENSMUST00000110834 828 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
GabpaQ00422 Prelid3b-203ENSMUST00000120822 622 ntTSL 3 BASIC12.2□□□□□ -0.46
GabpaQ00422 Ywhaq-ps3-201ENSMUST00000120944 738 ntBASIC12.2□□□□□ -0.46
GabpaQ00422 4930533B01Rik-201ENSMUST00000123377 1029 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
GabpaQ00422 3010001F23Rik-201ENSMUST00000130625 876 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
GabpaQ00422 Gm13031-201ENSMUST00000140501 924 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
GabpaQ00422 Gm16226-204ENSMUST00000162639 423 ntTSL 3 BASIC12.2□□□□□ -0.46
GabpaQ00422 Tex33-202ENSMUST00000165170 1072 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
GabpaQ00422 Gm13272-201ENSMUST00000179425 811 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
GabpaQ00422 Uba52-ps-201ENSMUST00000183770 379 ntBASIC12.2□□□□□ -0.46
GabpaQ00422 1700019D03Rik-207ENSMUST00000191441 638 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
GabpaQ00422 Gm3318-201ENSMUST00000217604 1183 ntBASIC12.2□□□□□ -0.46
GabpaQ00422 AC134913.2-201ENSMUST00000225017 771 ntBASIC12.2□□□□□ -0.46
GabpaQ00422 AC134860.2-201ENSMUST00000225277 1036 ntBASIC12.2□□□□□ -0.46
GabpaQ00422 2010001K21Rik-201ENSMUST00000060680 519 ntBASIC12.2□□□□□ -0.46
GabpaQ00422 Tex33-201ENSMUST00000074380 1147 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
GabpaQ00422 Gm9507-201ENSMUST00000095491 877 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
GabpaQ00422 Defa3-201ENSMUST00000098893 410 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
GabpaQ00422 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
GabpaQ00422 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
GabpaQ00422 Zfp830-201ENSMUST00000056677 1591 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
GabpaQ00422 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
GabpaQ00422 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
GabpaQ00422 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
GabpaQ00422 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
GabpaQ00422 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
GabpaQ00422 Adcy8-202ENSMUST00000228014 6900 ntAPPRIS ALT2 BASIC12.2□□□□□ -0.46
GabpaQ00422 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
GabpaQ00422 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
GabpaQ00422 Myc-204ENSMUST00000160009 1765 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
GabpaQ00422 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
GabpaQ00422 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
GabpaQ00422 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
GabpaQ00422 Elmo2-201ENSMUST00000071699 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
GabpaQ00422 Acsl4-201ENSMUST00000033634 5280 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
GabpaQ00422 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
GabpaQ00422 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
GabpaQ00422 Sez6l-201ENSMUST00000075387 6055 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
GabpaQ00422 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
GabpaQ00422 Gm42851-201ENSMUST00000201325 1411 ntBASIC12.2□□□□□ -0.46
GabpaQ00422 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
GabpaQ00422 Prim2-201ENSMUST00000027312 1975 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
GabpaQ00422 Slc25a17-201ENSMUST00000023040 1667 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
GabpaQ00422 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
GabpaQ00422 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC12.19□□□□□ -0.46
GabpaQ00422 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
GabpaQ00422 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
GabpaQ00422 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
GabpaQ00422 Olfr46-203ENSMUST00000214180 7750 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
GabpaQ00422 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC12.19□□□□□ -0.46
GabpaQ00422 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms