Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
CiitaP79621 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC11.68□□□□□ -0.54
CiitaP79621 Babam2-204ENSMUST00000114515 1497 ntTSL 5 BASIC11.68□□□□□ -0.54
CiitaP79621 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
CiitaP79621 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
CiitaP79621 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
CiitaP79621 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CiitaP79621 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
CiitaP79621 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
CiitaP79621 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CiitaP79621 Gm45719-201ENSMUST00000207954 1662 ntBASIC11.68□□□□□ -0.54
CiitaP79621 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC11.68□□□□□ -0.54
CiitaP79621 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
CiitaP79621 Ano4-202ENSMUST00000181976 1410 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
CiitaP79621 Ttc7b-206ENSMUST00000223020 3307 ntTSL 5 BASIC11.68□□□□□ -0.54
CiitaP79621 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CiitaP79621 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
CiitaP79621 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
CiitaP79621 Kcne2-202ENSMUST00000113971 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CiitaP79621 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
CiitaP79621 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CiitaP79621 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC11.67□□□□□ -0.54
CiitaP79621 Angel1-201ENSMUST00000021682 3850 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CiitaP79621 Cutal-203ENSMUST00000113068 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CiitaP79621 Nrf1-208ENSMUST00000115208 2492 ntTSL 5 BASIC11.67□□□□□ -0.54
CiitaP79621 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC11.67□□□□□ -0.54
CiitaP79621 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CiitaP79621 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
CiitaP79621 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CiitaP79621 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
CiitaP79621 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CiitaP79621 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
CiitaP79621 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
CiitaP79621 Adig-202ENSMUST00000109484 488 ntTSL 2 BASIC11.67□□□□□ -0.54
CiitaP79621 Lemd1-201ENSMUST00000112357 964 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
CiitaP79621 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CiitaP79621 Gm14222-201ENSMUST00000128681 575 ntTSL 2 BASIC11.67□□□□□ -0.54
CiitaP79621 Nudt7-204ENSMUST00000134593 707 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
CiitaP79621 Gm12688-201ENSMUST00000136525 701 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
CiitaP79621 Gm16441-201ENSMUST00000138176 924 ntBASIC11.67□□□□□ -0.54
CiitaP79621 Gm6038-201ENSMUST00000154310 948 ntBASIC11.67□□□□□ -0.54
CiitaP79621 Mocs2-201ENSMUST00000015680 1152 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CiitaP79621 Gm27956-201ENSMUST00000175604 260 ntBASIC11.67□□□□□ -0.54
CiitaP79621 Gm26550-201ENSMUST00000180699 1184 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
CiitaP79621 Gm16619-201ENSMUST00000181817 1210 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
CiitaP79621 Gm8601-201ENSMUST00000182096 909 ntBASIC11.67□□□□□ -0.54
CiitaP79621 Mir8111-201ENSMUST00000184463 137 ntBASIC11.67□□□□□ -0.54
CiitaP79621 Plet1os-202ENSMUST00000190941 1119 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
CiitaP79621 Gm35584-201ENSMUST00000191767 641 ntTSL 5 BASIC11.67□□□□□ -0.54
CiitaP79621 Gm45542-201ENSMUST00000210456 438 ntTSL 2 BASIC11.67□□□□□ -0.54
CiitaP79621 Gm18001-201ENSMUST00000212023 688 ntBASIC11.67□□□□□ -0.54
CiitaP79621 BC106175-202ENSMUST00000219344 1213 ntBASIC11.67□□□□□ -0.54
CiitaP79621 CT025689.1-201ENSMUST00000225214 283 ntBASIC11.67□□□□□ -0.54
CiitaP79621 AC164883.7-201ENSMUST00000228534 851 ntBASIC11.67□□□□□ -0.54
CiitaP79621 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
CiitaP79621 Adig-201ENSMUST00000059889 632 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CiitaP79621 Elob-201ENSMUST00000069579 508 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CiitaP79621 Ptges3l-201ENSMUST00000093933 748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
CiitaP79621 Atf7-201ENSMUST00000096143 390 ntBASIC11.67□□□□□ -0.54
CiitaP79621 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CiitaP79621 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC11.67□□□□□ -0.54
CiitaP79621 Tbp-203ENSMUST00000118001 1652 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
CiitaP79621 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
CiitaP79621 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
CiitaP79621 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC11.67□□□□□ -0.54
CiitaP79621 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
CiitaP79621 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CiitaP79621 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC11.67□□□□□ -0.54
CiitaP79621 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
CiitaP79621 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
CiitaP79621 Hyal2-206ENSMUST00000195681 2968 ntBASIC11.67□□□□□ -0.54
CiitaP79621 Gm5532-201ENSMUST00000097531 1751 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
CiitaP79621 Gsdma3-202ENSMUST00000107508 1587 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
CiitaP79621 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
CiitaP79621 AW549877-201ENSMUST00000046633 5076 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CiitaP79621 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
CiitaP79621 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
CiitaP79621 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
CiitaP79621 Galm-201ENSMUST00000039205 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CiitaP79621 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CiitaP79621 Prnd-201ENSMUST00000110169 1918 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CiitaP79621 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
CiitaP79621 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
CiitaP79621 Msl1-202ENSMUST00000037930 1303 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
CiitaP79621 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
CiitaP79621 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CiitaP79621 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
CiitaP79621 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CiitaP79621 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
CiitaP79621 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CiitaP79621 Rpl7a-201ENSMUST00000102898 914 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CiitaP79621 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC11.66□□□□□ -0.54
CiitaP79621 Mir1249-201ENSMUST00000116791 98 ntBASIC11.66□□□□□ -0.54
CiitaP79621 Gm11634-201ENSMUST00000154147 755 ntAPPRIS ALT2 TSL 3 BASIC11.66□□□□□ -0.54
CiitaP79621 Gm9625-201ENSMUST00000180422 955 ntBASIC11.66□□□□□ -0.54
CiitaP79621 Gm9916-201ENSMUST00000192943 1228 ntBASIC11.66□□□□□ -0.54
CiitaP79621 Lsm8-204ENSMUST00000201141 503 ntTSL 3 BASIC11.66□□□□□ -0.54
CiitaP79621 Gm2448-201ENSMUST00000207080 559 ntBASIC11.66□□□□□ -0.54
CiitaP79621 D730050B12Rik-201ENSMUST00000223149 585 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
CiitaP79621 Rnasek-201ENSMUST00000040428 611 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms