Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm11996-201ENSMUST00000117538 915 ntBASIC11.39□□□□□ -0.59
Shmt1P50431 Ifitm7-201ENSMUST00000117803 853 ntAPPRIS P5 TSL 1 (best) BASIC11.39□□□□□ -0.59
Shmt1P50431 Nnmt-202ENSMUST00000119426 912 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Shmt1P50431 Gm11573-201ENSMUST00000119956 394 ntBASIC11.39□□□□□ -0.59
Shmt1P50431 Gm12712-201ENSMUST00000120676 801 ntBASIC11.39□□□□□ -0.59
Shmt1P50431 4930579F01Rik-201ENSMUST00000012186 1732 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Shmt1P50431 7330404K18Rik-201ENSMUST00000125558 487 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Shmt1P50431 Gm16288-201ENSMUST00000137940 367 ntBASIC11.39□□□□□ -0.59
Shmt1P50431 Gm24346-201ENSMUST00000158712 194 ntBASIC11.39□□□□□ -0.59
Shmt1P50431 Gm16167-201ENSMUST00000160428 1065 ntBASIC11.39□□□□□ -0.59
Shmt1P50431 Prdx2-208ENSMUST00000164807 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Shmt1P50431 Gm17606-201ENSMUST00000169818 234 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Shmt1P50431 Gm22876-201ENSMUST00000175450 298 ntBASIC11.39□□□□□ -0.59
Shmt1P50431 Gm37368-201ENSMUST00000193173 3212 ntBASIC11.39□□□□□ -0.59
Shmt1P50431 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Shmt1P50431 Gm44498-201ENSMUST00000199509 111 ntBASIC11.39□□□□□ -0.59
Shmt1P50431 Gm44155-201ENSMUST00000203923 412 ntBASIC11.39□□□□□ -0.59
Shmt1P50431 Gm31557-201ENSMUST00000213825 973 ntTSL 5 BASIC11.39□□□□□ -0.59
Shmt1P50431 Gm31557-202ENSMUST00000213995 722 ntTSL 5 BASIC11.39□□□□□ -0.59
Shmt1P50431 AC112146.1-201ENSMUST00000221641 733 ntTSL 3 BASIC11.39□□□□□ -0.59
Shmt1P50431 AC154436.1-201ENSMUST00000227272 782 ntBASIC11.39□□□□□ -0.59
Shmt1P50431 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Shmt1P50431 Taar7a-201ENSMUST00000078532 1077 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Shmt1P50431 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Shmt1P50431 Taar7b-201ENSMUST00000092658 1077 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Shmt1P50431 Taar5-201ENSMUST00000092659 1014 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Shmt1P50431 Uqcc3-201ENSMUST00000096253 829 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Shmt1P50431 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Shmt1P50431 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Shmt1P50431 Nop2-201ENSMUST00000044200 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Shmt1P50431 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Shmt1P50431 Ttc39a-202ENSMUST00000106618 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Shmt1P50431 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Shmt1P50431 Gm8752-201ENSMUST00000173427 1694 ntBASIC11.39□□□□□ -0.59
Shmt1P50431 Vstm2a-201ENSMUST00000109645 3264 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Shmt1P50431 4930566F21Rik-201ENSMUST00000201177 1535 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Shmt1P50431 Mpp4-203ENSMUST00000114275 2982 ntAPPRIS P4 TSL 2 BASIC11.39□□□□□ -0.59
Shmt1P50431 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Shmt1P50431 Gemin8-202ENSMUST00000087169 1928 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Shmt1P50431 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Shmt1P50431 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Shmt1P50431 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Shmt1P50431 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Shmt1P50431 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Shmt1P50431 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Shmt1P50431 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Shmt1P50431 Oscp1-203ENSMUST00000143712 1473 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Shmt1P50431 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Shmt1P50431 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Shmt1P50431 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Shmt1P50431 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Shmt1P50431 Gm44415-201ENSMUST00000204151 2112 ntBASIC11.38□□□□□ -0.59
Shmt1P50431 Gm15519-201ENSMUST00000120088 1566 ntBASIC11.38□□□□□ -0.59
Shmt1P50431 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Shmt1P50431 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC11.38□□□□□ -0.59
Shmt1P50431 Hnrnpc-210ENSMUST00000228232 2535 ntAPPRIS P5 BASIC11.38□□□□□ -0.59
Shmt1P50431 Gm37697-201ENSMUST00000195680 1844 ntBASIC11.38□□□□□ -0.59
Shmt1P50431 Ccl19-ps1-201ENSMUST00000119621 327 ntBASIC11.38□□□□□ -0.59
Shmt1P50431 Gm14113-201ENSMUST00000121399 976 ntBASIC11.38□□□□□ -0.59
Shmt1P50431 Gm11993-201ENSMUST00000121861 820 ntBASIC11.38□□□□□ -0.59
Shmt1P50431 Fthl17-ps2-201ENSMUST00000122268 528 ntBASIC11.38□□□□□ -0.59
Shmt1P50431 Gm17019-201ENSMUST00000167908 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Shmt1P50431 Gm13272-201ENSMUST00000179425 811 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Shmt1P50431 1700020A23Rik-203ENSMUST00000189961 541 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Shmt1P50431 Gm38313-201ENSMUST00000191953 1266 ntBASIC11.38□□□□□ -0.59
Shmt1P50431 Ighv5-8-202ENSMUST00000191967 337 ntBASIC11.38□□□□□ -0.59
Shmt1P50431 Gm38321-201ENSMUST00000195053 235 ntBASIC11.38□□□□□ -0.59
Shmt1P50431 Gm7902-201ENSMUST00000198842 947 ntBASIC11.38□□□□□ -0.59
Shmt1P50431 Gm39397-201ENSMUST00000212331 228 ntTSL 5 BASIC11.38□□□□□ -0.59
Shmt1P50431 Zmiz1os1-202ENSMUST00000225188 1223 ntBASIC11.38□□□□□ -0.59
Shmt1P50431 Tsga10ip-201ENSMUST00000044527 487 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Shmt1P50431 Olfr456-201ENSMUST00000057251 1052 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Shmt1P50431 Rhox8-201ENSMUST00000071885 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Shmt1P50431 Hcst-201ENSMUST00000075062 442 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Shmt1P50431 Olfr115-201ENSMUST00000076936 939 ntAPPRIS P2 BASIC11.38□□□□□ -0.59
Shmt1P50431 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Shmt1P50431 Cap2-202ENSMUST00000119341 2454 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Shmt1P50431 Btc-201ENSMUST00000121044 2876 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Shmt1P50431 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Shmt1P50431 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Shmt1P50431 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Shmt1P50431 Mei4-203ENSMUST00000189832 2578 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Shmt1P50431 Plekha7-206ENSMUST00000182487 3476 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Shmt1P50431 Lta-201ENSMUST00000025266 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Shmt1P50431 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Shmt1P50431 Epx-201ENSMUST00000049768 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Shmt1P50431 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Shmt1P50431 Eif2s2-201ENSMUST00000099173 2542 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Shmt1P50431 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Shmt1P50431 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Shmt1P50431 Babam2-204ENSMUST00000114515 1497 ntTSL 5 BASIC11.38□□□□□ -0.59
Shmt1P50431 Eef1akmt4-202ENSMUST00000119224 1464 ntTSL 2 BASIC11.38□□□□□ -0.59
Shmt1P50431 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Shmt1P50431 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Shmt1P50431 Slc44a4-202ENSMUST00000169230 2246 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Shmt1P50431 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Shmt1P50431 AC164426.2-201ENSMUST00000225993 2492 ntBASIC11.37□□□□□ -0.59
Shmt1P50431 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Shmt1P50431 Inpp4a-202ENSMUST00000058307 2963 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Shmt1P50431 Gm19951-201ENSMUST00000222616 1328 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms