Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Cxcl12P40224 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cxcl12P40224 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC11.08□□□□□ -0.63
Cxcl12P40224 Olfr463-203ENSMUST00000217095 1977 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Cxcl12P40224 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cxcl12P40224 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cxcl12P40224 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cxcl12P40224 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC11.08□□□□□ -0.64
Cxcl12P40224 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cxcl12P40224 Olfr95-201ENSMUST00000060728 5129 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Cxcl12P40224 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cxcl12P40224 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Cxcl12P40224 Edn1-201ENSMUST00000021796 2139 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cxcl12P40224 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC11.08□□□□□ -0.64
Cxcl12P40224 Ctss-201ENSMUST00000015667 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cxcl12P40224 4930433J02Rik-201ENSMUST00000194719 1386 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cxcl12P40224 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cxcl12P40224 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cxcl12P40224 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Cxcl12P40224 Pmp22-201ENSMUST00000018361 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cxcl12P40224 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Cxcl12P40224 Gm11235-201ENSMUST00000117763 333 ntBASIC11.08□□□□□ -0.64
Cxcl12P40224 Gm8163-201ENSMUST00000122020 1060 ntBASIC11.08□□□□□ -0.64
Cxcl12P40224 Maats1os-201ENSMUST00000133496 326 ntTSL 3 BASIC11.08□□□□□ -0.64
Cxcl12P40224 Gm13898-201ENSMUST00000141865 610 ntBASIC11.08□□□□□ -0.64
Cxcl12P40224 Gm7255-201ENSMUST00000187371 908 ntBASIC11.08□□□□□ -0.64
Cxcl12P40224 Gm28746-201ENSMUST00000187453 380 ntBASIC11.08□□□□□ -0.64
Cxcl12P40224 B130024G19Rik-204ENSMUST00000191084 634 ntTSL 5 BASIC11.08□□□□□ -0.64
Cxcl12P40224 Gm43401-201ENSMUST00000198829 394 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cxcl12P40224 Gm32098-201ENSMUST00000211305 479 ntTSL 5 BASIC11.08□□□□□ -0.64
Cxcl12P40224 Scgb2b2-201ENSMUST00000038835 520 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cxcl12P40224 Olfr1349-201ENSMUST00000051982 1054 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Cxcl12P40224 Mrps14-202ENSMUST00000097193 787 ntTSL 2 BASIC11.08□□□□□ -0.64
Cxcl12P40224 Wfdc6a-201ENSMUST00000099096 805 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cxcl12P40224 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Cxcl12P40224 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cxcl12P40224 Oprm1-213ENSMUST00000105604 1616 ntAPPRIS ALT1 TSL 5 BASIC11.08□□□□□ -0.64
Cxcl12P40224 Ucp1-201ENSMUST00000034146 1636 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cxcl12P40224 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cxcl12P40224 Gm16499-201ENSMUST00000204648 2065 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cxcl12P40224 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cxcl12P40224 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cxcl12P40224 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cxcl12P40224 Gm17435-202ENSMUST00000212699 1998 ntBASIC11.08□□□□□ -0.64
Cxcl12P40224 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Cxcl12P40224 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cxcl12P40224 Olfr624-201ENSMUST00000062144 5731 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Cxcl12P40224 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cxcl12P40224 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cxcl12P40224 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cxcl12P40224 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cxcl12P40224 Babam2-202ENSMUST00000071531 1308 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cxcl12P40224 Gm33466-201ENSMUST00000199819 1689 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cxcl12P40224 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cxcl12P40224 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cxcl12P40224 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
Cxcl12P40224 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cxcl12P40224 Gm26637-201ENSMUST00000180880 2289 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cxcl12P40224 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC11.07□□□□□ -0.64
Cxcl12P40224 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Cxcl12P40224 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cxcl12P40224 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cxcl12P40224 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cxcl12P40224 Dip2a-205ENSMUST00000160048 6551 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Cxcl12P40224 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cxcl12P40224 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cxcl12P40224 Slc17a8-202ENSMUST00000105295 1863 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cxcl12P40224 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Cxcl12P40224 Ifna5-201ENSMUST00000102804 570 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Cxcl12P40224 Gm24981-201ENSMUST00000104459 132 ntBASIC11.07□□□□□ -0.64
Cxcl12P40224 Guca2b-202ENSMUST00000106309 697 ntAPPRIS ALT2 TSL 3 BASIC11.07□□□□□ -0.64
Cxcl12P40224 Ccdc32-203ENSMUST00000110834 828 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cxcl12P40224 Gm11544-201ENSMUST00000120215 382 ntBASIC11.07□□□□□ -0.64
Cxcl12P40224 Plxna4os3-201ENSMUST00000127668 269 ntTSL 3 BASIC11.07□□□□□ -0.64
Cxcl12P40224 Gm11670-201ENSMUST00000143435 511 ntTSL 2 BASIC11.07□□□□□ -0.64
Cxcl12P40224 Gm23999-201ENSMUST00000158057 104 ntBASIC11.07□□□□□ -0.64
Cxcl12P40224 Gm17120-201ENSMUST00000164734 743 ntTSL 3 BASIC11.07□□□□□ -0.64
Cxcl12P40224 Rergl-201ENSMUST00000170650 958 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cxcl12P40224 Gm21963-201ENSMUST00000179519 330 ntBASIC11.07□□□□□ -0.64
Cxcl12P40224 Gm26611-201ENSMUST00000181449 785 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cxcl12P40224 Rbp2-204ENSMUST00000189446 803 ntAPPRIS P1 TSL 3 BASIC11.07□□□□□ -0.64
Cxcl12P40224 Gm38004-201ENSMUST00000192972 357 ntBASIC11.07□□□□□ -0.64
Cxcl12P40224 CT025538.1-201ENSMUST00000223638 369 ntBASIC11.07□□□□□ -0.64
Cxcl12P40224 AC114585.2-201ENSMUST00000227693 486 ntBASIC11.07□□□□□ -0.64
Cxcl12P40224 Cxcl3-201ENSMUST00000031326 1016 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cxcl12P40224 Xlr4b-201ENSMUST00000069077 1200 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cxcl12P40224 Gm10134-201ENSMUST00000074761 381 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Cxcl12P40224 Olfr1330-201ENSMUST00000094830 948 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Cxcl12P40224 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cxcl12P40224 Gm38309-201ENSMUST00000192063 1518 ntBASIC11.07□□□□□ -0.64
Cxcl12P40224 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cxcl12P40224 Camk2g-202ENSMUST00000080440 3604 ntAPPRIS P4 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cxcl12P40224 Gm38376-201ENSMUST00000195493 2253 ntBASIC11.07□□□□□ -0.64
Cxcl12P40224 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Cxcl12P40224 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cxcl12P40224 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Cxcl12P40224 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC11.07□□□□□ -0.64
Cxcl12P40224 Adgrl3-215ENSMUST00000120673 5178 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Cxcl12P40224 Pou6f1-204ENSMUST00000176271 4575 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cxcl12P40224 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms