Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Ccdc180J3QNE4 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC19.38■□□□□ 0.69
Ccdc180J3QNE4 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc180J3QNE4 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc180J3QNE4 Gm38227-201ENSMUST00000193036 1602 ntBASIC19.37■□□□□ 0.69
Ccdc180J3QNE4 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc180J3QNE4 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc180J3QNE4 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc180J3QNE4 A330033J07Rik-201ENSMUST00000180921 2816 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc180J3QNE4 Ighv1-49-201ENSMUST00000103519 294 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Ccdc180J3QNE4 Gm25723-201ENSMUST00000104530 126 ntBASIC19.37■□□□□ 0.69
Ccdc180J3QNE4 Gm12684-201ENSMUST00000118675 999 ntBASIC19.37■□□□□ 0.69
Ccdc180J3QNE4 Gm5190-201ENSMUST00000192434 357 ntBASIC19.37■□□□□ 0.69
Ccdc180J3QNE4 Gm44460-201ENSMUST00000196179 129 ntBASIC19.37■□□□□ 0.69
Ccdc180J3QNE4 Ckb-ps2-201ENSMUST00000198886 1001 ntBASIC19.37■□□□□ 0.69
Ccdc180J3QNE4 Crip1-205ENSMUST00000199089 509 ntTSL 3 BASIC19.37■□□□□ 0.69
Ccdc180J3QNE4 Gm44709-201ENSMUST00000207649 448 ntTSL 5 BASIC19.37■□□□□ 0.69
Ccdc180J3QNE4 Gm44908-201ENSMUST00000208610 266 ntBASIC19.37■□□□□ 0.69
Ccdc180J3QNE4 Gm45846-201ENSMUST00000211170 446 ntTSL 2 BASIC19.37■□□□□ 0.69
Ccdc180J3QNE4 Gm36287-201ENSMUST00000223481 796 ntTSL 5 BASIC19.37■□□□□ 0.69
Ccdc180J3QNE4 Hesx1-202ENSMUST00000224331 983 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Ccdc180J3QNE4 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Ccdc180J3QNE4 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc180J3QNE4 Stxbp4-203ENSMUST00000107875 1660 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc180J3QNE4 Gm8752-201ENSMUST00000173427 1694 ntBASIC19.37■□□□□ 0.69
Ccdc180J3QNE4 Gm37582-201ENSMUST00000192953 1409 ntBASIC19.37■□□□□ 0.69
Ccdc180J3QNE4 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc180J3QNE4 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Ccdc180J3QNE4 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc180J3QNE4 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC19.37■□□□□ 0.69
Ccdc180J3QNE4 Lims1-201ENSMUST00000020077 1565 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc180J3QNE4 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc180J3QNE4 Gm20773-202ENSMUST00000193306 1341 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Ccdc180J3QNE4 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc180J3QNE4 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc180J3QNE4 Gm12736-201ENSMUST00000119330 236 ntBASIC19.36■□□□□ 0.69
Ccdc180J3QNE4 Gm45591-201ENSMUST00000129058 843 ntTSL 3 BASIC19.36■□□□□ 0.69
Ccdc180J3QNE4 Gm26594-201ENSMUST00000180383 1094 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc180J3QNE4 Gm31678-201ENSMUST00000198262 454 ntTSL 3 BASIC19.36■□□□□ 0.69
Ccdc180J3QNE4 AC161877.1-201ENSMUST00000227736 699 ntBASIC19.36■□□□□ 0.69
Ccdc180J3QNE4 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc180J3QNE4 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc180J3QNE4 Urod-201ENSMUST00000030446 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc180J3QNE4 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc180J3QNE4 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Ccdc180J3QNE4 Gm45041-201ENSMUST00000207366 3108 ntBASIC19.36■□□□□ 0.69
Ccdc180J3QNE4 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc180J3QNE4 Myc-208ENSMUST00000191178 1362 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc180J3QNE4 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc180J3QNE4 Cap1-201ENSMUST00000069533 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc180J3QNE4 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
Ccdc180J3QNE4 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc180J3QNE4 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC19.36■□□□□ 0.69
Ccdc180J3QNE4 0610037L13Rik-203ENSMUST00000106726 515 ntTSL 5 BASIC19.36■□□□□ 0.69
Ccdc180J3QNE4 Olfr1372-ps1-201ENSMUST00000121007 934 ntBASIC19.36■□□□□ 0.69
Ccdc180J3QNE4 1700017J07Rik-201ENSMUST00000140241 473 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc180J3QNE4 Gm13778-202ENSMUST00000146633 537 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc180J3QNE4 C130080G10Rik-204ENSMUST00000155185 954 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc180J3QNE4 1700028K03Rik-202ENSMUST00000159902 742 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Ccdc180J3QNE4 Tead1-211ENSMUST00000170352 1218 ntTSL 5 BASIC19.36■□□□□ 0.69
Ccdc180J3QNE4 Gm26978-201ENSMUST00000182843 304 ntTSL 3 BASIC19.36■□□□□ 0.69
Ccdc180J3QNE4 Mir6360-201ENSMUST00000184278 126 ntBASIC19.36■□□□□ 0.69
Ccdc180J3QNE4 Spin3-ps-201ENSMUST00000192825 770 ntBASIC19.36■□□□□ 0.69
Ccdc180J3QNE4 Gimd1-205ENSMUST00000212852 1234 ntTSL 5 BASIC19.36■□□□□ 0.69
Ccdc180J3QNE4 AC166902.2-202ENSMUST00000213191 1038 ntTSL 5 BASIC19.36■□□□□ 0.69
Ccdc180J3QNE4 4930458K08Rik-201ENSMUST00000219952 1264 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc180J3QNE4 CT025618.1-201ENSMUST00000227409 1279 ntBASIC19.36■□□□□ 0.69
Ccdc180J3QNE4 Tas2r135-201ENSMUST00000070178 1093 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Ccdc180J3QNE4 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc180J3QNE4 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Ccdc180J3QNE4 Zw10-201ENSMUST00000034803 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc180J3QNE4 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc180J3QNE4 Optc-201ENSMUST00000124051 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc180J3QNE4 Igsf5-201ENSMUST00000000163 1851 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc180J3QNE4 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc180J3QNE4 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Ccdc180J3QNE4 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc180J3QNE4 Gm16252-201ENSMUST00000144420 857 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc180J3QNE4 Glmp-207ENSMUST00000176425 960 ntTSL 5 BASIC19.35■□□□□ 0.69
Ccdc180J3QNE4 Ighv1-86-201ENSMUST00000200562 353 ntBASIC19.35■□□□□ 0.69
Ccdc180J3QNE4 Gm18646-201ENSMUST00000212240 1063 ntBASIC19.35■□□□□ 0.69
Ccdc180J3QNE4 Tulp2-203ENSMUST00000107758 1597 ntTSL 5 BASIC19.35■□□□□ 0.69
Ccdc180J3QNE4 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Ccdc180J3QNE4 AC154220.1-201ENSMUST00000225033 1705 ntBASIC19.35■□□□□ 0.69
Ccdc180J3QNE4 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Ccdc180J3QNE4 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC19.35■□□□□ 0.69
Ccdc180J3QNE4 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc180J3QNE4 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC19.35■□□□□ 0.69
Ccdc180J3QNE4 Mtbp-201ENSMUST00000022998 3144 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc180J3QNE4 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc180J3QNE4 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc180J3QNE4 Vmn2r18-201ENSMUST00000165928 2367 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Ccdc180J3QNE4 Gm3372-201ENSMUST00000198806 1792 ntBASIC19.34■□□□□ 0.69
Ccdc180J3QNE4 Gba-201ENSMUST00000077367 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc180J3QNE4 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc180J3QNE4 AC130671.3-201ENSMUST00000227393 1897 ntBASIC19.34■□□□□ 0.69
Ccdc180J3QNE4 Cog3-203ENSMUST00000227473 4197 ntBASIC19.34■□□□□ 0.69
Ccdc180J3QNE4 Acsbg1-201ENSMUST00000034822 2880 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc180J3QNE4 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc180J3QNE4 Gm11411-201ENSMUST00000117951 719 ntBASIC19.34■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms