Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Rab11a-204ENSMUST00000167569 726 ntTSL 3 BASIC13.04□□□□□ -0.32
NpcdF8VQB8 Gm6686-201ENSMUST00000178455 258 ntBASIC13.04□□□□□ -0.32
NpcdF8VQB8 Gm27675-201ENSMUST00000184527 94 ntBASIC13.04□□□□□ -0.32
NpcdF8VQB8 6030460B20Rik-201ENSMUST00000191764 1058 ntBASIC13.04□□□□□ -0.32
NpcdF8VQB8 Gm37944-201ENSMUST00000194233 414 ntBASIC13.04□□□□□ -0.32
NpcdF8VQB8 Adh6-ps1-202ENSMUST00000196293 754 ntBASIC13.04□□□□□ -0.32
NpcdF8VQB8 Gm3945-201ENSMUST00000196637 683 ntBASIC13.04□□□□□ -0.32
NpcdF8VQB8 Gm44304-201ENSMUST00000200509 145 ntBASIC13.04□□□□□ -0.32
NpcdF8VQB8 Gm33570-201ENSMUST00000207608 1254 ntTSL 5 BASIC13.04□□□□□ -0.32
NpcdF8VQB8 AC164614.1-201ENSMUST00000216038 397 ntBASIC13.04□□□□□ -0.32
NpcdF8VQB8 CT009550.1-201ENSMUST00000225750 864 ntBASIC13.04□□□□□ -0.32
NpcdF8VQB8 Rpl37-201ENSMUST00000045356 835 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NpcdF8VQB8 Adig-201ENSMUST00000059889 632 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NpcdF8VQB8 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
NpcdF8VQB8 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
NpcdF8VQB8 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NpcdF8VQB8 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NpcdF8VQB8 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
NpcdF8VQB8 Gm7405-201ENSMUST00000121476 1337 ntBASIC13.04□□□□□ -0.32
NpcdF8VQB8 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC13.04□□□□□ -0.32
NpcdF8VQB8 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
NpcdF8VQB8 Gm26684-202ENSMUST00000228229 8257 ntBASIC13.04□□□□□ -0.32
NpcdF8VQB8 Gm7642-201ENSMUST00000216345 1809 ntBASIC13.04□□□□□ -0.32
NpcdF8VQB8 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
NpcdF8VQB8 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
NpcdF8VQB8 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
NpcdF8VQB8 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
NpcdF8VQB8 AC127597.1-201ENSMUST00000225697 5711 ntBASIC13.04□□□□□ -0.32
NpcdF8VQB8 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
NpcdF8VQB8 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
NpcdF8VQB8 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NpcdF8VQB8 Atxn7l1-203ENSMUST00000110824 1675 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
NpcdF8VQB8 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NpcdF8VQB8 Gm45532-201ENSMUST00000210342 3620 ntBASIC13.03□□□□□ -0.32
NpcdF8VQB8 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NpcdF8VQB8 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
NpcdF8VQB8 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
NpcdF8VQB8 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
NpcdF8VQB8 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
NpcdF8VQB8 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
NpcdF8VQB8 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
NpcdF8VQB8 Snx10-202ENSMUST00000114439 968 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NpcdF8VQB8 Gm11919-201ENSMUST00000117609 721 ntBASIC13.03□□□□□ -0.32
NpcdF8VQB8 Gm15702-201ENSMUST00000119680 444 ntBASIC13.03□□□□□ -0.32
NpcdF8VQB8 Gm14152-201ENSMUST00000127020 1073 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
NpcdF8VQB8 2810403D21Rik-204ENSMUST00000144421 747 ntTSL 3 BASIC13.03□□□□□ -0.32
NpcdF8VQB8 Gm16013-201ENSMUST00000152249 353 ntTSL 3 BASIC13.03□□□□□ -0.32
NpcdF8VQB8 Stamos-201ENSMUST00000152524 801 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
NpcdF8VQB8 Gm29595-202ENSMUST00000187954 466 ntTSL 3 BASIC13.03□□□□□ -0.32
NpcdF8VQB8 Zfp787-203ENSMUST00000207331 376 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
NpcdF8VQB8 Gm6991-201ENSMUST00000218475 1178 ntBASIC13.03□□□□□ -0.32
NpcdF8VQB8 Gm5194-201ENSMUST00000221457 742 ntBASIC13.03□□□□□ -0.32
NpcdF8VQB8 AC159006.3-201ENSMUST00000226918 664 ntBASIC13.03□□□□□ -0.32
NpcdF8VQB8 AC163646.3-202ENSMUST00000228685 691 ntBASIC13.03□□□□□ -0.32
NpcdF8VQB8 Gal-201ENSMUST00000025842 712 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NpcdF8VQB8 Gm9531-201ENSMUST00000055820 638 ntTSL 3 BASIC13.03□□□□□ -0.32
NpcdF8VQB8 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
NpcdF8VQB8 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NpcdF8VQB8 Eddm3b-201ENSMUST00000100645 1412 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NpcdF8VQB8 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
NpcdF8VQB8 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
NpcdF8VQB8 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
NpcdF8VQB8 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC13.03□□□□□ -0.32
NpcdF8VQB8 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
NpcdF8VQB8 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
NpcdF8VQB8 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
NpcdF8VQB8 Mtch2-202ENSMUST00000111467 2281 ntTSL 5 BASIC13.02□□□□□ -0.32
NpcdF8VQB8 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
NpcdF8VQB8 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
NpcdF8VQB8 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
NpcdF8VQB8 Gm10537-201ENSMUST00000192625 1698 ntBASIC13.02□□□□□ -0.32
NpcdF8VQB8 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
NpcdF8VQB8 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
NpcdF8VQB8 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
NpcdF8VQB8 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
NpcdF8VQB8 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
NpcdF8VQB8 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
NpcdF8VQB8 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
NpcdF8VQB8 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
NpcdF8VQB8 Gm42971-201ENSMUST00000199228 2079 ntBASIC13.02□□□□□ -0.33
NpcdF8VQB8 Snrnp27-201ENSMUST00000001186 885 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
NpcdF8VQB8 Rps18-ps1-201ENSMUST00000120838 459 ntBASIC13.02□□□□□ -0.33
NpcdF8VQB8 Gm11521-201ENSMUST00000143302 329 ntTSL 3 BASIC13.02□□□□□ -0.33
NpcdF8VQB8 Gm16755-201ENSMUST00000180595 933 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
NpcdF8VQB8 Mir6934-201ENSMUST00000183965 62 ntBASIC13.02□□□□□ -0.33
NpcdF8VQB8 Gm8828-201ENSMUST00000196786 1290 ntBASIC13.02□□□□□ -0.33
NpcdF8VQB8 Gm9409-201ENSMUST00000197017 316 ntBASIC13.02□□□□□ -0.33
NpcdF8VQB8 AC154585.1-201ENSMUST00000218917 997 ntBASIC13.02□□□□□ -0.33
NpcdF8VQB8 1700016D06Rik-201ENSMUST00000033906 1263 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
NpcdF8VQB8 Scgb1c1-201ENSMUST00000035300 455 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
NpcdF8VQB8 Galp-201ENSMUST00000037553 650 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
NpcdF8VQB8 Fam3b-201ENSMUST00000049721 853 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
NpcdF8VQB8 Olfr434-203ENSMUST00000216562 1318 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
NpcdF8VQB8 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
NpcdF8VQB8 Oprk1-201ENSMUST00000027038 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
NpcdF8VQB8 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
NpcdF8VQB8 Fam222b-203ENSMUST00000155571 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
NpcdF8VQB8 Amd-ps3-201ENSMUST00000072796 1496 ntBASIC13.02□□□□□ -0.33
NpcdF8VQB8 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
NpcdF8VQB8 Bet1-201ENSMUST00000049166 1516 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms