Protein–RNA interactions for Protein: Q9JM58

Crlf1, Cytokine receptor-like factor 1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf1Q9JM58 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Crlf1Q9JM58 Gm10812-201ENSMUST00000099864 546 ntBASIC16.16■□□□□ 0.18
Crlf1Q9JM58 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Crlf1Q9JM58 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Crlf1Q9JM58 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Crlf1Q9JM58 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Crlf1Q9JM58 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Crlf1Q9JM58 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
Crlf1Q9JM58 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Crlf1Q9JM58 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Crlf1Q9JM58 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC16.15■□□□□ 0.18
Crlf1Q9JM58 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Crlf1Q9JM58 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Crlf1Q9JM58 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Crlf1Q9JM58 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Crlf1Q9JM58 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Crlf1Q9JM58 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Crlf1Q9JM58 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Crlf1Q9JM58 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
Crlf1Q9JM58 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.18
Crlf1Q9JM58 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Crlf1Q9JM58 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Crlf1Q9JM58 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Crlf1Q9JM58 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC16.14■□□□□ 0.17
Crlf1Q9JM58 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Crlf1Q9JM58 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Crlf1Q9JM58 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC16.14■□□□□ 0.17
Crlf1Q9JM58 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Crlf1Q9JM58 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Crlf1Q9JM58 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Crlf1Q9JM58 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Crlf1Q9JM58 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Crlf1Q9JM58 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Crlf1Q9JM58 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Crlf1Q9JM58 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Crlf1Q9JM58 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Crlf1Q9JM58 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC16.13■□□□□ 0.17
Crlf1Q9JM58 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC16.13■□□□□ 0.17
Crlf1Q9JM58 AC135963.1-201ENSMUST00000211640 717 ntBASIC16.13■□□□□ 0.17
Crlf1Q9JM58 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Crlf1Q9JM58 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Crlf1Q9JM58 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Crlf1Q9JM58 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Crlf1Q9JM58 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Crlf1Q9JM58 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Crlf1Q9JM58 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Crlf1Q9JM58 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Crlf1Q9JM58 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Crlf1Q9JM58 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC16.12■□□□□ 0.17
Crlf1Q9JM58 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Crlf1Q9JM58 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Crlf1Q9JM58 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Crlf1Q9JM58 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC16.12■□□□□ 0.17
Crlf1Q9JM58 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Crlf1Q9JM58 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Crlf1Q9JM58 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC16.11■□□□□ 0.17
Crlf1Q9JM58 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Crlf1Q9JM58 Mir6982-201ENSMUST00000184354 68 ntBASIC16.11■□□□□ 0.17
Crlf1Q9JM58 Gm5408-201ENSMUST00000197998 747 ntBASIC16.11■□□□□ 0.17
Crlf1Q9JM58 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Crlf1Q9JM58 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Crlf1Q9JM58 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Crlf1Q9JM58 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC16.11■□□□□ 0.17
Crlf1Q9JM58 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Crlf1Q9JM58 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Crlf1Q9JM58 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Crlf1Q9JM58 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Crlf1Q9JM58 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Crlf1Q9JM58 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Crlf1Q9JM58 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC16.1■□□□□ 0.17
Crlf1Q9JM58 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC16.1■□□□□ 0.17
Crlf1Q9JM58 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Crlf1Q9JM58 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC16.1■□□□□ 0.17
Crlf1Q9JM58 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Crlf1Q9JM58 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Crlf1Q9JM58 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Crlf1Q9JM58 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Crlf1Q9JM58 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Crlf1Q9JM58 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Crlf1Q9JM58 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Crlf1Q9JM58 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Crlf1Q9JM58 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Crlf1Q9JM58 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Crlf1Q9JM58 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Crlf1Q9JM58 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Crlf1Q9JM58 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC16.09■□□□□ 0.17
Crlf1Q9JM58 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Crlf1Q9JM58 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Crlf1Q9JM58 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC16.09■□□□□ 0.17
Crlf1Q9JM58 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Crlf1Q9JM58 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Crlf1Q9JM58 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Crlf1Q9JM58 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Crlf1Q9JM58 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Crlf1Q9JM58 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
Crlf1Q9JM58 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
Crlf1Q9JM58 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Crlf1Q9JM58 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Crlf1Q9JM58 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Crlf1Q9JM58 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms