Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC18.77■□□□□ 0.6
Hmgn3Q9DCB1 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hmgn3Q9DCB1 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hmgn3Q9DCB1 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hmgn3Q9DCB1 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.77■□□□□ 0.59
Hmgn3Q9DCB1 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Hmgn3Q9DCB1 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Hmgn3Q9DCB1 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hmgn3Q9DCB1 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hmgn3Q9DCB1 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hmgn3Q9DCB1 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Hmgn3Q9DCB1 Gm11687-201ENSMUST00000118911 886 ntBASIC18.76■□□□□ 0.59
Hmgn3Q9DCB1 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Hmgn3Q9DCB1 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hmgn3Q9DCB1 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hmgn3Q9DCB1 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hmgn3Q9DCB1 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Hmgn3Q9DCB1 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hmgn3Q9DCB1 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hmgn3Q9DCB1 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Hmgn3Q9DCB1 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hmgn3Q9DCB1 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Hmgn3Q9DCB1 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hmgn3Q9DCB1 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hmgn3Q9DCB1 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hmgn3Q9DCB1 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Hmgn3Q9DCB1 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hmgn3Q9DCB1 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.75■□□□□ 0.59
Hmgn3Q9DCB1 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.74■□□□□ 0.59
Hmgn3Q9DCB1 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.74■□□□□ 0.59
Hmgn3Q9DCB1 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hmgn3Q9DCB1 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hmgn3Q9DCB1 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hmgn3Q9DCB1 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
Hmgn3Q9DCB1 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hmgn3Q9DCB1 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hmgn3Q9DCB1 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.74■□□□□ 0.59
Hmgn3Q9DCB1 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hmgn3Q9DCB1 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hmgn3Q9DCB1 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hmgn3Q9DCB1 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Hmgn3Q9DCB1 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hmgn3Q9DCB1 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Hmgn3Q9DCB1 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hmgn3Q9DCB1 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC18.73■□□□□ 0.59
Hmgn3Q9DCB1 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Hmgn3Q9DCB1 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hmgn3Q9DCB1 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hmgn3Q9DCB1 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.73■□□□□ 0.59
Hmgn3Q9DCB1 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hmgn3Q9DCB1 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Hmgn3Q9DCB1 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Hmgn3Q9DCB1 AC151971.4-201ENSMUST00000214717 704 ntBASIC18.72■□□□□ 0.59
Hmgn3Q9DCB1 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hmgn3Q9DCB1 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Hmgn3Q9DCB1 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hmgn3Q9DCB1 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Hmgn3Q9DCB1 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hmgn3Q9DCB1 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Hmgn3Q9DCB1 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hmgn3Q9DCB1 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.71■□□□□ 0.59
Hmgn3Q9DCB1 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hmgn3Q9DCB1 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hmgn3Q9DCB1 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hmgn3Q9DCB1 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
Hmgn3Q9DCB1 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hmgn3Q9DCB1 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hmgn3Q9DCB1 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Hmgn3Q9DCB1 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Hmgn3Q9DCB1 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Hmgn3Q9DCB1 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hmgn3Q9DCB1 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC18.7■□□□□ 0.58
Hmgn3Q9DCB1 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC18.7■□□□□ 0.58
Hmgn3Q9DCB1 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hmgn3Q9DCB1 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hmgn3Q9DCB1 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hmgn3Q9DCB1 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hmgn3Q9DCB1 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hmgn3Q9DCB1 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Hmgn3Q9DCB1 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hmgn3Q9DCB1 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Hmgn3Q9DCB1 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hmgn3Q9DCB1 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Hmgn3Q9DCB1 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC18.68■□□□□ 0.58
Hmgn3Q9DCB1 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hmgn3Q9DCB1 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hmgn3Q9DCB1 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hmgn3Q9DCB1 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hmgn3Q9DCB1 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Hmgn3Q9DCB1 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hmgn3Q9DCB1 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hmgn3Q9DCB1 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hmgn3Q9DCB1 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hmgn3Q9DCB1 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hmgn3Q9DCB1 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hmgn3Q9DCB1 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hmgn3Q9DCB1 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hmgn3Q9DCB1 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hmgn3Q9DCB1 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hmgn3Q9DCB1 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms