Protein–RNA interactions for Protein: Q9D5J6

Shpk, Sedoheptulokinase, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShpkQ9D5J6 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ShpkQ9D5J6 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
ShpkQ9D5J6 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
ShpkQ9D5J6 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ShpkQ9D5J6 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ShpkQ9D5J6 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC16.72■□□□□ 0.27
ShpkQ9D5J6 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ShpkQ9D5J6 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC16.72■□□□□ 0.27
ShpkQ9D5J6 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
ShpkQ9D5J6 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ShpkQ9D5J6 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ShpkQ9D5J6 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
ShpkQ9D5J6 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
ShpkQ9D5J6 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
ShpkQ9D5J6 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ShpkQ9D5J6 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ShpkQ9D5J6 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ShpkQ9D5J6 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ShpkQ9D5J6 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.26
ShpkQ9D5J6 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC16.7■□□□□ 0.26
ShpkQ9D5J6 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC16.7■□□□□ 0.26
ShpkQ9D5J6 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
ShpkQ9D5J6 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
ShpkQ9D5J6 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ShpkQ9D5J6 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ShpkQ9D5J6 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC16.7■□□□□ 0.26
ShpkQ9D5J6 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
ShpkQ9D5J6 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
ShpkQ9D5J6 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ShpkQ9D5J6 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ShpkQ9D5J6 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
ShpkQ9D5J6 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC16.7■□□□□ 0.26
ShpkQ9D5J6 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
ShpkQ9D5J6 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ShpkQ9D5J6 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ShpkQ9D5J6 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
ShpkQ9D5J6 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC16.7■□□□□ 0.26
ShpkQ9D5J6 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ShpkQ9D5J6 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC16.69■□□□□ 0.26
ShpkQ9D5J6 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
ShpkQ9D5J6 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC16.69■□□□□ 0.26
ShpkQ9D5J6 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
ShpkQ9D5J6 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
ShpkQ9D5J6 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ShpkQ9D5J6 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ShpkQ9D5J6 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ShpkQ9D5J6 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC16.68■□□□□ 0.26
ShpkQ9D5J6 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ShpkQ9D5J6 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
ShpkQ9D5J6 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC16.68■□□□□ 0.26
ShpkQ9D5J6 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC16.68■□□□□ 0.26
ShpkQ9D5J6 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC16.68■□□□□ 0.26
ShpkQ9D5J6 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ShpkQ9D5J6 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ShpkQ9D5J6 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ShpkQ9D5J6 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ShpkQ9D5J6 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ShpkQ9D5J6 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ShpkQ9D5J6 Gm43909-201ENSMUST00000203443 1876 ntBASIC16.67■□□□□ 0.26
ShpkQ9D5J6 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ShpkQ9D5J6 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ShpkQ9D5J6 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
ShpkQ9D5J6 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ShpkQ9D5J6 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
ShpkQ9D5J6 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
ShpkQ9D5J6 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
ShpkQ9D5J6 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ShpkQ9D5J6 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ShpkQ9D5J6 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ShpkQ9D5J6 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
ShpkQ9D5J6 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
ShpkQ9D5J6 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ShpkQ9D5J6 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ShpkQ9D5J6 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ShpkQ9D5J6 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
ShpkQ9D5J6 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ShpkQ9D5J6 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
ShpkQ9D5J6 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
ShpkQ9D5J6 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC16.66■□□□□ 0.26
ShpkQ9D5J6 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ShpkQ9D5J6 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ShpkQ9D5J6 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ShpkQ9D5J6 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ShpkQ9D5J6 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ShpkQ9D5J6 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
ShpkQ9D5J6 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
ShpkQ9D5J6 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
ShpkQ9D5J6 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
ShpkQ9D5J6 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
ShpkQ9D5J6 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ShpkQ9D5J6 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ShpkQ9D5J6 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
ShpkQ9D5J6 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ShpkQ9D5J6 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ShpkQ9D5J6 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ShpkQ9D5J6 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ShpkQ9D5J6 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ShpkQ9D5J6 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
ShpkQ9D5J6 Gm43231-201ENSMUST00000202960 2258 ntBASIC16.65■□□□□ 0.26
ShpkQ9D5J6 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms