Protein–RNA interactions for Protein: Q9D506

Gm3404, Predicted gene 3404, mousemouse

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3404Q9D506 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gm3404Q9D506 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Gm3404Q9D506 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Gm3404Q9D506 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gm3404Q9D506 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Gm3404Q9D506 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gm3404Q9D506 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gm3404Q9D506 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gm3404Q9D506 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gm3404Q9D506 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gm3404Q9D506 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Gm3404Q9D506 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gm3404Q9D506 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gm3404Q9D506 Gm43759-201ENSMUST00000196925 1261 ntBASIC21.22■□□□□ 0.99
Gm3404Q9D506 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Gm3404Q9D506 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gm3404Q9D506 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC21.22■□□□□ 0.99
Gm3404Q9D506 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gm3404Q9D506 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gm3404Q9D506 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Gm3404Q9D506 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Gm3404Q9D506 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Gm3404Q9D506 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Gm3404Q9D506 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Gm3404Q9D506 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Gm3404Q9D506 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gm3404Q9D506 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC21.2■□□□□ 0.98
Gm3404Q9D506 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Gm3404Q9D506 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC21.2■□□□□ 0.98
Gm3404Q9D506 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gm3404Q9D506 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Gm3404Q9D506 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gm3404Q9D506 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gm3404Q9D506 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Gm3404Q9D506 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Gm3404Q9D506 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Gm3404Q9D506 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Gm3404Q9D506 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Gm3404Q9D506 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Gm3404Q9D506 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC21.19■□□□□ 0.98
Gm3404Q9D506 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Gm3404Q9D506 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Gm3404Q9D506 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Gm3404Q9D506 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC21.18■□□□□ 0.98
Gm3404Q9D506 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Gm3404Q9D506 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC21.18■□□□□ 0.98
Gm3404Q9D506 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Gm3404Q9D506 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Gm3404Q9D506 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Gm3404Q9D506 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Gm3404Q9D506 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Gm3404Q9D506 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Gm3404Q9D506 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Gm3404Q9D506 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Gm3404Q9D506 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Gm3404Q9D506 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Gm3404Q9D506 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Gm3404Q9D506 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
Gm3404Q9D506 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Gm3404Q9D506 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Gm3404Q9D506 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Gm3404Q9D506 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Gm3404Q9D506 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Gm3404Q9D506 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Gm3404Q9D506 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Gm3404Q9D506 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Gm3404Q9D506 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Gm3404Q9D506 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Gm3404Q9D506 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Gm3404Q9D506 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Gm3404Q9D506 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Gm3404Q9D506 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC21.15■□□□□ 0.98
Gm3404Q9D506 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Gm3404Q9D506 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Gm3404Q9D506 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC21.15■□□□□ 0.98
Gm3404Q9D506 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Gm3404Q9D506 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Gm3404Q9D506 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Gm3404Q9D506 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Gm3404Q9D506 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC21.14■□□□□ 0.98
Gm3404Q9D506 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Gm3404Q9D506 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
Gm3404Q9D506 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Gm3404Q9D506 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Gm3404Q9D506 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Gm3404Q9D506 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Gm3404Q9D506 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Gm3404Q9D506 Gm43006-201ENSMUST00000197702 1602 ntBASIC21.14■□□□□ 0.97
Gm3404Q9D506 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Gm3404Q9D506 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Gm3404Q9D506 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Gm3404Q9D506 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Gm3404Q9D506 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Gm3404Q9D506 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Gm3404Q9D506 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
Gm3404Q9D506 Mir6236-201ENSMUST00000184437 123 ntBASIC21.13■□□□□ 0.97
Gm3404Q9D506 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC21.13■□□□□ 0.97
Gm3404Q9D506 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Gm3404Q9D506 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Gm3404Q9D506 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms