Protein–RNA interactions for Protein: Q96EQ9

Prdm9, Histone-lysine N-methyltransferase PRDM9, mousemouse

Predictions only

Length 843 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm9Q96EQ9 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Prdm9Q96EQ9 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Prdm9Q96EQ9 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Prdm9Q96EQ9 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19.78■□□□□ 0.76
Prdm9Q96EQ9 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Prdm9Q96EQ9 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Prdm9Q96EQ9 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Prdm9Q96EQ9 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC19.77■□□□□ 0.76
Prdm9Q96EQ9 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Prdm9Q96EQ9 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Prdm9Q96EQ9 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Prdm9Q96EQ9 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Prdm9Q96EQ9 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.75
Prdm9Q96EQ9 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.77■□□□□ 0.75
Prdm9Q96EQ9 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Prdm9Q96EQ9 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Prdm9Q96EQ9 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Prdm9Q96EQ9 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC19.76■□□□□ 0.75
Prdm9Q96EQ9 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC19.76■□□□□ 0.75
Prdm9Q96EQ9 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC19.76■□□□□ 0.75
Prdm9Q96EQ9 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Prdm9Q96EQ9 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Prdm9Q96EQ9 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Prdm9Q96EQ9 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Prdm9Q96EQ9 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Prdm9Q96EQ9 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Prdm9Q96EQ9 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Prdm9Q96EQ9 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Prdm9Q96EQ9 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Prdm9Q96EQ9 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC19.75■□□□□ 0.75
Prdm9Q96EQ9 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Prdm9Q96EQ9 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Prdm9Q96EQ9 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Prdm9Q96EQ9 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Prdm9Q96EQ9 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Prdm9Q96EQ9 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.74■□□□□ 0.75
Prdm9Q96EQ9 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Prdm9Q96EQ9 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Prdm9Q96EQ9 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Prdm9Q96EQ9 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Prdm9Q96EQ9 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Prdm9Q96EQ9 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC19.73■□□□□ 0.75
Prdm9Q96EQ9 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Prdm9Q96EQ9 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Prdm9Q96EQ9 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Prdm9Q96EQ9 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Prdm9Q96EQ9 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Prdm9Q96EQ9 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Prdm9Q96EQ9 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Prdm9Q96EQ9 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Prdm9Q96EQ9 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Prdm9Q96EQ9 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Prdm9Q96EQ9 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Prdm9Q96EQ9 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Prdm9Q96EQ9 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Prdm9Q96EQ9 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Prdm9Q96EQ9 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC19.71■□□□□ 0.75
Prdm9Q96EQ9 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.71■□□□□ 0.75
Prdm9Q96EQ9 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Prdm9Q96EQ9 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Prdm9Q96EQ9 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Prdm9Q96EQ9 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Prdm9Q96EQ9 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Prdm9Q96EQ9 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Prdm9Q96EQ9 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
Prdm9Q96EQ9 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC19.7■□□□□ 0.74
Prdm9Q96EQ9 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Prdm9Q96EQ9 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Prdm9Q96EQ9 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Prdm9Q96EQ9 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Prdm9Q96EQ9 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Prdm9Q96EQ9 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Prdm9Q96EQ9 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
Prdm9Q96EQ9 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC19.69■□□□□ 0.74
Prdm9Q96EQ9 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Prdm9Q96EQ9 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Prdm9Q96EQ9 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Prdm9Q96EQ9 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Prdm9Q96EQ9 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Prdm9Q96EQ9 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Prdm9Q96EQ9 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Prdm9Q96EQ9 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Prdm9Q96EQ9 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Prdm9Q96EQ9 Gm26833-201ENSMUST00000180899 440 ntBASIC19.68■□□□□ 0.74
Prdm9Q96EQ9 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC19.68■□□□□ 0.74
Prdm9Q96EQ9 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Prdm9Q96EQ9 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Prdm9Q96EQ9 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
Prdm9Q96EQ9 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Prdm9Q96EQ9 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Prdm9Q96EQ9 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC19.67■□□□□ 0.74
Prdm9Q96EQ9 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Prdm9Q96EQ9 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Prdm9Q96EQ9 Smad6-203ENSMUST00000179458 273 ntBASIC19.67■□□□□ 0.74
Prdm9Q96EQ9 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Prdm9Q96EQ9 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.67■□□□□ 0.74
Prdm9Q96EQ9 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Prdm9Q96EQ9 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Prdm9Q96EQ9 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Prdm9Q96EQ9 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms