Protein–RNA interactions for Protein: Q91XD2

Lims2, LIM and senescent cell antigen-like-containing domain protein 2, mousemouse

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims2Q91XD2 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Lims2Q91XD2 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Lims2Q91XD2 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Lims2Q91XD2 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Lims2Q91XD2 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Lims2Q91XD2 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC20.68■□□□□ 0.9
Lims2Q91XD2 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Lims2Q91XD2 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.67■□□□□ 0.9
Lims2Q91XD2 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
Lims2Q91XD2 Gm2011-201ENSMUST00000203124 1263 ntBASIC20.67■□□□□ 0.9
Lims2Q91XD2 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Lims2Q91XD2 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Lims2Q91XD2 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Lims2Q91XD2 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Lims2Q91XD2 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Lims2Q91XD2 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.66■□□□□ 0.9
Lims2Q91XD2 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Lims2Q91XD2 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Lims2Q91XD2 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Lims2Q91XD2 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Lims2Q91XD2 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.65■□□□□ 0.9
Lims2Q91XD2 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Lims2Q91XD2 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC20.65■□□□□ 0.9
Lims2Q91XD2 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC20.65■□□□□ 0.9
Lims2Q91XD2 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC20.65■□□□□ 0.9
Lims2Q91XD2 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Lims2Q91XD2 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC20.65■□□□□ 0.9
Lims2Q91XD2 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.65■□□□□ 0.9
Lims2Q91XD2 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Lims2Q91XD2 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
Lims2Q91XD2 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Lims2Q91XD2 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Lims2Q91XD2 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC20.64■□□□□ 0.89
Lims2Q91XD2 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC20.64■□□□□ 0.89
Lims2Q91XD2 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC20.64■□□□□ 0.89
Lims2Q91XD2 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Lims2Q91XD2 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Lims2Q91XD2 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Lims2Q91XD2 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Lims2Q91XD2 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Lims2Q91XD2 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Lims2Q91XD2 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Lims2Q91XD2 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Lims2Q91XD2 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.63■□□□□ 0.89
Lims2Q91XD2 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC20.63■□□□□ 0.89
Lims2Q91XD2 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Lims2Q91XD2 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Lims2Q91XD2 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Lims2Q91XD2 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Lims2Q91XD2 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Lims2Q91XD2 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Lims2Q91XD2 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Lims2Q91XD2 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.63■□□□□ 0.89
Lims2Q91XD2 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC20.62■□□□□ 0.89
Lims2Q91XD2 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.62■□□□□ 0.89
Lims2Q91XD2 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Lims2Q91XD2 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Lims2Q91XD2 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.62■□□□□ 0.89
Lims2Q91XD2 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Lims2Q91XD2 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Lims2Q91XD2 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Lims2Q91XD2 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Lims2Q91XD2 Gm43017-201ENSMUST00000198296 752 ntBASIC20.62■□□□□ 0.89
Lims2Q91XD2 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC20.62■□□□□ 0.89
Lims2Q91XD2 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Lims2Q91XD2 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lims2Q91XD2 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.61■□□□□ 0.89
Lims2Q91XD2 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lims2Q91XD2 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lims2Q91XD2 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lims2Q91XD2 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Lims2Q91XD2 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lims2Q91XD2 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC20.61■□□□□ 0.89
Lims2Q91XD2 Smad6-203ENSMUST00000179458 273 ntBASIC20.61■□□□□ 0.89
Lims2Q91XD2 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC20.61■□□□□ 0.89
Lims2Q91XD2 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lims2Q91XD2 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lims2Q91XD2 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.61■□□□□ 0.89
Lims2Q91XD2 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lims2Q91XD2 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lims2Q91XD2 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lims2Q91XD2 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Lims2Q91XD2 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Lims2Q91XD2 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC20.6■□□□□ 0.89
Lims2Q91XD2 Gm21168-201ENSMUST00000199646 1096 ntBASIC20.6■□□□□ 0.89
Lims2Q91XD2 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC20.6■□□□□ 0.89
Lims2Q91XD2 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Lims2Q91XD2 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.59■□□□□ 0.89
Lims2Q91XD2 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Lims2Q91XD2 AC165080.2-201ENSMUST00000217491 1530 ntBASIC20.59■□□□□ 0.89
Lims2Q91XD2 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lims2Q91XD2 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC20.59■□□□□ 0.89
Lims2Q91XD2 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
Lims2Q91XD2 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lims2Q91XD2 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lims2Q91XD2 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lims2Q91XD2 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lims2Q91XD2 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Lims2Q91XD2 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Lims2Q91XD2 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms