Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Rpa1Q8VEE4 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Rpa1Q8VEE4 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Rpa1Q8VEE4 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rpa1Q8VEE4 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rpa1Q8VEE4 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Rpa1Q8VEE4 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Rpa1Q8VEE4 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Rpa1Q8VEE4 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rpa1Q8VEE4 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rpa1Q8VEE4 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rpa1Q8VEE4 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Rpa1Q8VEE4 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Rpa1Q8VEE4 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rpa1Q8VEE4 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Rpa1Q8VEE4 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rpa1Q8VEE4 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rpa1Q8VEE4 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rpa1Q8VEE4 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC20.04■□□□□ 0.8
Rpa1Q8VEE4 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rpa1Q8VEE4 Gm14523-201ENSMUST00000117260 558 ntBASIC20.04■□□□□ 0.8
Rpa1Q8VEE4 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC20.04■□□□□ 0.8
Rpa1Q8VEE4 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rpa1Q8VEE4 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Rpa1Q8VEE4 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.04■□□□□ 0.8
Rpa1Q8VEE4 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC20.04■□□□□ 0.8
Rpa1Q8VEE4 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rpa1Q8VEE4 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rpa1Q8VEE4 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rpa1Q8VEE4 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rpa1Q8VEE4 Gm28536-201ENSMUST00000190971 1317 ntBASIC20.03■□□□□ 0.8
Rpa1Q8VEE4 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rpa1Q8VEE4 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Rpa1Q8VEE4 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC20.03■□□□□ 0.8
Rpa1Q8VEE4 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rpa1Q8VEE4 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rpa1Q8VEE4 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rpa1Q8VEE4 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rpa1Q8VEE4 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rpa1Q8VEE4 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC20.03■□□□□ 0.8
Rpa1Q8VEE4 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.8
Rpa1Q8VEE4 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
Rpa1Q8VEE4 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rpa1Q8VEE4 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rpa1Q8VEE4 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rpa1Q8VEE4 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Rpa1Q8VEE4 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Rpa1Q8VEE4 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Rpa1Q8VEE4 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rpa1Q8VEE4 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Rpa1Q8VEE4 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Rpa1Q8VEE4 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rpa1Q8VEE4 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rpa1Q8VEE4 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC20.01■□□□□ 0.79
Rpa1Q8VEE4 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Rpa1Q8VEE4 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Rpa1Q8VEE4 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rpa1Q8VEE4 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rpa1Q8VEE4 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Rpa1Q8VEE4 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
Rpa1Q8VEE4 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC20■□□□□ 0.79
Rpa1Q8VEE4 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC20■□□□□ 0.79
Rpa1Q8VEE4 Gm7332-201ENSMUST00000118351 454 ntBASIC20■□□□□ 0.79
Rpa1Q8VEE4 Gm12366-201ENSMUST00000121722 873 ntBASIC20■□□□□ 0.79
Rpa1Q8VEE4 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC20■□□□□ 0.79
Rpa1Q8VEE4 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC20■□□□□ 0.79
Rpa1Q8VEE4 Gm5786-201ENSMUST00000085368 882 ntBASIC20■□□□□ 0.79
Rpa1Q8VEE4 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rpa1Q8VEE4 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Rpa1Q8VEE4 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rpa1Q8VEE4 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rpa1Q8VEE4 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rpa1Q8VEE4 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rpa1Q8VEE4 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Rpa1Q8VEE4 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.99■□□□□ 0.79
Rpa1Q8VEE4 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
Rpa1Q8VEE4 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC19.99■□□□□ 0.79
Rpa1Q8VEE4 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Rpa1Q8VEE4 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Rpa1Q8VEE4 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rpa1Q8VEE4 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC19.99■□□□□ 0.79
Rpa1Q8VEE4 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rpa1Q8VEE4 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rpa1Q8VEE4 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.99■□□□□ 0.79
Rpa1Q8VEE4 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rpa1Q8VEE4 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rpa1Q8VEE4 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Rpa1Q8VEE4 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC19.98■□□□□ 0.79
Rpa1Q8VEE4 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rpa1Q8VEE4 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Rpa1Q8VEE4 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rpa1Q8VEE4 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Rpa1Q8VEE4 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Rpa1Q8VEE4 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rpa1Q8VEE4 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rpa1Q8VEE4 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Rpa1Q8VEE4 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.97■□□□□ 0.79
Rpa1Q8VEE4 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Rpa1Q8VEE4 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Rpa1Q8VEE4 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms