Protein–RNA interactions for Protein: Q8VBZ3

Clptm1, Cleft lip and palate transmembrane protein 1 homolog, mousemouse

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clptm1Q8VBZ3 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Clptm1Q8VBZ3 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Clptm1Q8VBZ3 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.32■□□□□ 0.84
Clptm1Q8VBZ3 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Clptm1Q8VBZ3 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.32■□□□□ 0.84
Clptm1Q8VBZ3 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Clptm1Q8VBZ3 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Clptm1Q8VBZ3 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Clptm1Q8VBZ3 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Clptm1Q8VBZ3 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Clptm1Q8VBZ3 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Clptm1Q8VBZ3 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Clptm1Q8VBZ3 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC20.31■□□□□ 0.84
Clptm1Q8VBZ3 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Clptm1Q8VBZ3 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Clptm1Q8VBZ3 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Clptm1Q8VBZ3 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Clptm1Q8VBZ3 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Clptm1Q8VBZ3 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Clptm1Q8VBZ3 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC20.3■□□□□ 0.84
Clptm1Q8VBZ3 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Clptm1Q8VBZ3 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Clptm1Q8VBZ3 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Clptm1Q8VBZ3 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Clptm1Q8VBZ3 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Clptm1Q8VBZ3 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Clptm1Q8VBZ3 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.29■□□□□ 0.84
Clptm1Q8VBZ3 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Clptm1Q8VBZ3 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Clptm1Q8VBZ3 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.29■□□□□ 0.84
Clptm1Q8VBZ3 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.29■□□□□ 0.84
Clptm1Q8VBZ3 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Clptm1Q8VBZ3 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Clptm1Q8VBZ3 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Clptm1Q8VBZ3 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Clptm1Q8VBZ3 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Clptm1Q8VBZ3 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Clptm1Q8VBZ3 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Clptm1Q8VBZ3 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Clptm1Q8VBZ3 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Clptm1Q8VBZ3 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Clptm1Q8VBZ3 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Clptm1Q8VBZ3 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Clptm1Q8VBZ3 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Clptm1Q8VBZ3 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC20.27■□□□□ 0.84
Clptm1Q8VBZ3 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Clptm1Q8VBZ3 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Clptm1Q8VBZ3 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Clptm1Q8VBZ3 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC20.26■□□□□ 0.83
Clptm1Q8VBZ3 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Clptm1Q8VBZ3 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Clptm1Q8VBZ3 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Clptm1Q8VBZ3 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.26■□□□□ 0.83
Clptm1Q8VBZ3 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Clptm1Q8VBZ3 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Clptm1Q8VBZ3 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Clptm1Q8VBZ3 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Clptm1Q8VBZ3 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.25■□□□□ 0.83
Clptm1Q8VBZ3 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Clptm1Q8VBZ3 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Clptm1Q8VBZ3 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20.25■□□□□ 0.83
Clptm1Q8VBZ3 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Clptm1Q8VBZ3 Gm6139-201ENSMUST00000079261 882 ntBASIC20.25■□□□□ 0.83
Clptm1Q8VBZ3 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Clptm1Q8VBZ3 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Clptm1Q8VBZ3 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Clptm1Q8VBZ3 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Clptm1Q8VBZ3 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Clptm1Q8VBZ3 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Clptm1Q8VBZ3 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Clptm1Q8VBZ3 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Clptm1Q8VBZ3 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Clptm1Q8VBZ3 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Clptm1Q8VBZ3 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Clptm1Q8VBZ3 Gm43137-201ENSMUST00000198052 594 ntBASIC20.24■□□□□ 0.83
Clptm1Q8VBZ3 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.24■□□□□ 0.83
Clptm1Q8VBZ3 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Clptm1Q8VBZ3 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Clptm1Q8VBZ3 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Clptm1Q8VBZ3 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Clptm1Q8VBZ3 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Clptm1Q8VBZ3 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Clptm1Q8VBZ3 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Clptm1Q8VBZ3 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Clptm1Q8VBZ3 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Clptm1Q8VBZ3 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Clptm1Q8VBZ3 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Clptm1Q8VBZ3 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
Clptm1Q8VBZ3 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC20.22■□□□□ 0.83
Clptm1Q8VBZ3 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Clptm1Q8VBZ3 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
Clptm1Q8VBZ3 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Clptm1Q8VBZ3 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Clptm1Q8VBZ3 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Clptm1Q8VBZ3 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.21■□□□□ 0.83
Clptm1Q8VBZ3 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Clptm1Q8VBZ3 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.21■□□□□ 0.83
Clptm1Q8VBZ3 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
Clptm1Q8VBZ3 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Clptm1Q8VBZ3 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms