Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Sf3a1Q8K4Z5 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC24.5■■□□□ 1.51
Sf3a1Q8K4Z5 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
Sf3a1Q8K4Z5 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Sf3a1Q8K4Z5 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Sf3a1Q8K4Z5 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Sf3a1Q8K4Z5 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Sf3a1Q8K4Z5 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
Sf3a1Q8K4Z5 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC24.49■■□□□ 1.51
Sf3a1Q8K4Z5 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC24.49■■□□□ 1.51
Sf3a1Q8K4Z5 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC24.49■■□□□ 1.51
Sf3a1Q8K4Z5 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Sf3a1Q8K4Z5 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
Sf3a1Q8K4Z5 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Sf3a1Q8K4Z5 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Sf3a1Q8K4Z5 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC24.48■■□□□ 1.51
Sf3a1Q8K4Z5 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC24.48■■□□□ 1.51
Sf3a1Q8K4Z5 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC24.48■■□□□ 1.51
Sf3a1Q8K4Z5 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Sf3a1Q8K4Z5 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC24.48■■□□□ 1.51
Sf3a1Q8K4Z5 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Sf3a1Q8K4Z5 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Sf3a1Q8K4Z5 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
Sf3a1Q8K4Z5 Mir6236-201ENSMUST00000184437 123 ntBASIC24.47■■□□□ 1.51
Sf3a1Q8K4Z5 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC24.47■■□□□ 1.51
Sf3a1Q8K4Z5 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC24.47■■□□□ 1.51
Sf3a1Q8K4Z5 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Sf3a1Q8K4Z5 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC24.46■■□□□ 1.51
Sf3a1Q8K4Z5 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Sf3a1Q8K4Z5 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC24.46■■□□□ 1.51
Sf3a1Q8K4Z5 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC24.46■■□□□ 1.51
Sf3a1Q8K4Z5 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
Sf3a1Q8K4Z5 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
Sf3a1Q8K4Z5 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
Sf3a1Q8K4Z5 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
Sf3a1Q8K4Z5 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
Sf3a1Q8K4Z5 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC24.45■■□□□ 1.51
Sf3a1Q8K4Z5 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
Sf3a1Q8K4Z5 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
Sf3a1Q8K4Z5 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC24.45■■□□□ 1.5
Sf3a1Q8K4Z5 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Sf3a1Q8K4Z5 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Sf3a1Q8K4Z5 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Sf3a1Q8K4Z5 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Sf3a1Q8K4Z5 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC24.45■■□□□ 1.5
Sf3a1Q8K4Z5 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC24.45■■□□□ 1.5
Sf3a1Q8K4Z5 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Sf3a1Q8K4Z5 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC24.45■■□□□ 1.5
Sf3a1Q8K4Z5 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Sf3a1Q8K4Z5 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Sf3a1Q8K4Z5 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Sf3a1Q8K4Z5 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Sf3a1Q8K4Z5 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Sf3a1Q8K4Z5 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
Sf3a1Q8K4Z5 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC24.44■■□□□ 1.5
Sf3a1Q8K4Z5 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC24.44■■□□□ 1.5
Sf3a1Q8K4Z5 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Sf3a1Q8K4Z5 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
Sf3a1Q8K4Z5 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Sf3a1Q8K4Z5 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC24.43■■□□□ 1.5
Sf3a1Q8K4Z5 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC24.43■■□□□ 1.5
Sf3a1Q8K4Z5 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Sf3a1Q8K4Z5 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Sf3a1Q8K4Z5 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Sf3a1Q8K4Z5 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Sf3a1Q8K4Z5 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Sf3a1Q8K4Z5 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Sf3a1Q8K4Z5 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
Sf3a1Q8K4Z5 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Sf3a1Q8K4Z5 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Sf3a1Q8K4Z5 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Sf3a1Q8K4Z5 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Sf3a1Q8K4Z5 AC152827.1-201ENSMUST00000221143 2189 ntBASIC24.42■■□□□ 1.5
Sf3a1Q8K4Z5 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Sf3a1Q8K4Z5 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Sf3a1Q8K4Z5 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Sf3a1Q8K4Z5 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC24.41■■□□□ 1.5
Sf3a1Q8K4Z5 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC24.41■■□□□ 1.5
Sf3a1Q8K4Z5 Gm12821-201ENSMUST00000120022 600 ntBASIC24.41■■□□□ 1.5
Sf3a1Q8K4Z5 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC24.41■■□□□ 1.5
Sf3a1Q8K4Z5 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC24.41■■□□□ 1.5
Sf3a1Q8K4Z5 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC24.41■■□□□ 1.5
Sf3a1Q8K4Z5 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC24.41■■□□□ 1.5
Sf3a1Q8K4Z5 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Sf3a1Q8K4Z5 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Sf3a1Q8K4Z5 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC24.4■■□□□ 1.5
Sf3a1Q8K4Z5 Appbp2os-202ENSMUST00000206972 447 ntBASIC24.4■■□□□ 1.5
Sf3a1Q8K4Z5 Gm27045-201ENSMUST00000182145 1402 ntBASIC24.4■■□□□ 1.5
Sf3a1Q8K4Z5 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Sf3a1Q8K4Z5 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Sf3a1Q8K4Z5 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.5
Sf3a1Q8K4Z5 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Sf3a1Q8K4Z5 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC24.39■■□□□ 1.49
Sf3a1Q8K4Z5 Gm27454-201ENSMUST00000185090 204 ntBASIC24.39■■□□□ 1.49
Sf3a1Q8K4Z5 Gm43137-201ENSMUST00000198052 594 ntBASIC24.39■■□□□ 1.49
Sf3a1Q8K4Z5 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Sf3a1Q8K4Z5 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Sf3a1Q8K4Z5 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Sf3a1Q8K4Z5 Gm37035-201ENSMUST00000194809 2148 ntBASIC24.38■■□□□ 1.49
Sf3a1Q8K4Z5 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms