Protein–RNA interactions for Protein: Q8CHP0

Zc3h3, Zinc finger CCCH domain-containing protein 3, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h3Q8CHP0 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Zc3h3Q8CHP0 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Zc3h3Q8CHP0 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Zc3h3Q8CHP0 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.85■□□□□ 0.77
Zc3h3Q8CHP0 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Zc3h3Q8CHP0 AC115037.1-201ENSMUST00000223391 2173 ntBASIC19.84■□□□□ 0.77
Zc3h3Q8CHP0 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Zc3h3Q8CHP0 Gm13181-201ENSMUST00000120117 1069 ntBASIC19.84■□□□□ 0.77
Zc3h3Q8CHP0 Gm6365-201ENSMUST00000054711 744 ntBASIC19.84■□□□□ 0.77
Zc3h3Q8CHP0 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Zc3h3Q8CHP0 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Zc3h3Q8CHP0 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Zc3h3Q8CHP0 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Zc3h3Q8CHP0 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Zc3h3Q8CHP0 Gm13836-201ENSMUST00000121159 501 ntBASIC19.83■□□□□ 0.77
Zc3h3Q8CHP0 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Zc3h3Q8CHP0 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC19.83■□□□□ 0.77
Zc3h3Q8CHP0 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC19.83■□□□□ 0.77
Zc3h3Q8CHP0 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Zc3h3Q8CHP0 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Zc3h3Q8CHP0 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Zc3h3Q8CHP0 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Zc3h3Q8CHP0 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Zc3h3Q8CHP0 Gm29241-201ENSMUST00000189260 1096 ntBASIC19.82■□□□□ 0.76
Zc3h3Q8CHP0 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Zc3h3Q8CHP0 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Zc3h3Q8CHP0 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Zc3h3Q8CHP0 Gm7290-201ENSMUST00000104990 617 ntBASIC19.81■□□□□ 0.76
Zc3h3Q8CHP0 Gm12918-201ENSMUST00000120234 636 ntBASIC19.81■□□□□ 0.76
Zc3h3Q8CHP0 Gm15710-201ENSMUST00000121821 636 ntBASIC19.81■□□□□ 0.76
Zc3h3Q8CHP0 Gm37856-201ENSMUST00000191634 999 ntBASIC19.81■□□□□ 0.76
Zc3h3Q8CHP0 Gm5075-201ENSMUST00000196916 622 ntBASIC19.81■□□□□ 0.76
Zc3h3Q8CHP0 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Zc3h3Q8CHP0 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.81■□□□□ 0.76
Zc3h3Q8CHP0 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.81■□□□□ 0.76
Zc3h3Q8CHP0 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Zc3h3Q8CHP0 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Zc3h3Q8CHP0 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Zc3h3Q8CHP0 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Zc3h3Q8CHP0 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Zc3h3Q8CHP0 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Zc3h3Q8CHP0 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Zc3h3Q8CHP0 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC19.8■□□□□ 0.76
Zc3h3Q8CHP0 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Zc3h3Q8CHP0 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Zc3h3Q8CHP0 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Zc3h3Q8CHP0 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Zc3h3Q8CHP0 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC19.79■□□□□ 0.76
Zc3h3Q8CHP0 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Zc3h3Q8CHP0 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC19.79■□□□□ 0.76
Zc3h3Q8CHP0 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC19.79■□□□□ 0.76
Zc3h3Q8CHP0 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Zc3h3Q8CHP0 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Zc3h3Q8CHP0 AC153890.1-201ENSMUST00000220021 2469 ntBASIC19.79■□□□□ 0.76
Zc3h3Q8CHP0 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Zc3h3Q8CHP0 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Zc3h3Q8CHP0 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Zc3h3Q8CHP0 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Zc3h3Q8CHP0 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC19.78■□□□□ 0.76
Zc3h3Q8CHP0 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Zc3h3Q8CHP0 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Zc3h3Q8CHP0 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Zc3h3Q8CHP0 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Zc3h3Q8CHP0 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.76
Zc3h3Q8CHP0 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Zc3h3Q8CHP0 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Zc3h3Q8CHP0 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Zc3h3Q8CHP0 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Zc3h3Q8CHP0 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
Zc3h3Q8CHP0 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC19.77■□□□□ 0.76
Zc3h3Q8CHP0 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Zc3h3Q8CHP0 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC19.77■□□□□ 0.76
Zc3h3Q8CHP0 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Zc3h3Q8CHP0 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC19.77■□□□□ 0.75
Zc3h3Q8CHP0 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Zc3h3Q8CHP0 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Zc3h3Q8CHP0 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC19.76■□□□□ 0.75
Zc3h3Q8CHP0 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Zc3h3Q8CHP0 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Zc3h3Q8CHP0 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Zc3h3Q8CHP0 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Zc3h3Q8CHP0 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Zc3h3Q8CHP0 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Zc3h3Q8CHP0 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Zc3h3Q8CHP0 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Zc3h3Q8CHP0 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Zc3h3Q8CHP0 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Zc3h3Q8CHP0 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Zc3h3Q8CHP0 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Zc3h3Q8CHP0 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Zc3h3Q8CHP0 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Zc3h3Q8CHP0 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Zc3h3Q8CHP0 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC19.74■□□□□ 0.75
Zc3h3Q8CHP0 Trmt13-210ENSMUST00000198454 880 ntBASIC19.74■□□□□ 0.75
Zc3h3Q8CHP0 Gm44878-201ENSMUST00000205812 1295 ntBASIC19.74■□□□□ 0.75
Zc3h3Q8CHP0 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Zc3h3Q8CHP0 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Zc3h3Q8CHP0 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Zc3h3Q8CHP0 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Zc3h3Q8CHP0 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms