Protein–RNA interactions for Protein: Q8CCF0

Prpf31, U4/U6 small nuclear ribonucleoprotein Prp31, mousemouse

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf31Q8CCF0 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Prpf31Q8CCF0 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Prpf31Q8CCF0 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC21.94■■□□□ 1.1
Prpf31Q8CCF0 Mir6236-201ENSMUST00000184437 123 ntBASIC21.94■■□□□ 1.1
Prpf31Q8CCF0 Flvcr1-202ENSMUST00000191946 1216 ntBASIC21.94■■□□□ 1.1
Prpf31Q8CCF0 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
Prpf31Q8CCF0 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Prpf31Q8CCF0 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.94■■□□□ 1.1
Prpf31Q8CCF0 AC124392.1-201ENSMUST00000225172 5324 ntBASIC21.93■■□□□ 1.1
Prpf31Q8CCF0 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Prpf31Q8CCF0 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
Prpf31Q8CCF0 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC21.93■■□□□ 1.1
Prpf31Q8CCF0 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC21.93■■□□□ 1.1
Prpf31Q8CCF0 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC21.93■■□□□ 1.1
Prpf31Q8CCF0 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
Prpf31Q8CCF0 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC21.92■■□□□ 1.1
Prpf31Q8CCF0 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC21.92■■□□□ 1.1
Prpf31Q8CCF0 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Prpf31Q8CCF0 Gm21168-201ENSMUST00000199646 1096 ntBASIC21.92■■□□□ 1.1
Prpf31Q8CCF0 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Prpf31Q8CCF0 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Prpf31Q8CCF0 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Prpf31Q8CCF0 Gm6277-202ENSMUST00000224036 2779 ntBASIC21.92■■□□□ 1.1
Prpf31Q8CCF0 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Prpf31Q8CCF0 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Prpf31Q8CCF0 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Prpf31Q8CCF0 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Prpf31Q8CCF0 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
Prpf31Q8CCF0 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC21.91■■□□□ 1.1
Prpf31Q8CCF0 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC21.91■■□□□ 1.1
Prpf31Q8CCF0 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
Prpf31Q8CCF0 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC21.91■■□□□ 1.1
Prpf31Q8CCF0 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
Prpf31Q8CCF0 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Prpf31Q8CCF0 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC21.9■■□□□ 1.1
Prpf31Q8CCF0 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Prpf31Q8CCF0 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Prpf31Q8CCF0 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Prpf31Q8CCF0 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC21.9■■□□□ 1.1
Prpf31Q8CCF0 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Prpf31Q8CCF0 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC21.9■■□□□ 1.1
Prpf31Q8CCF0 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Prpf31Q8CCF0 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
Prpf31Q8CCF0 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
Prpf31Q8CCF0 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Prpf31Q8CCF0 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Prpf31Q8CCF0 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Prpf31Q8CCF0 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Prpf31Q8CCF0 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Prpf31Q8CCF0 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Prpf31Q8CCF0 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Prpf31Q8CCF0 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
Prpf31Q8CCF0 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Prpf31Q8CCF0 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Prpf31Q8CCF0 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC21.88■■□□□ 1.09
Prpf31Q8CCF0 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.87■■□□□ 1.09
Prpf31Q8CCF0 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC21.87■■□□□ 1.09
Prpf31Q8CCF0 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Prpf31Q8CCF0 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Prpf31Q8CCF0 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Prpf31Q8CCF0 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Prpf31Q8CCF0 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Prpf31Q8CCF0 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Prpf31Q8CCF0 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC21.87■■□□□ 1.09
Prpf31Q8CCF0 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Prpf31Q8CCF0 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21.87■■□□□ 1.09
Prpf31Q8CCF0 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Prpf31Q8CCF0 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
Prpf31Q8CCF0 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Prpf31Q8CCF0 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Prpf31Q8CCF0 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Prpf31Q8CCF0 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Prpf31Q8CCF0 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC21.85■■□□□ 1.09
Prpf31Q8CCF0 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Prpf31Q8CCF0 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Prpf31Q8CCF0 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Prpf31Q8CCF0 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Prpf31Q8CCF0 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Prpf31Q8CCF0 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Prpf31Q8CCF0 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Prpf31Q8CCF0 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC21.84■■□□□ 1.09
Prpf31Q8CCF0 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Prpf31Q8CCF0 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Prpf31Q8CCF0 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC21.84■■□□□ 1.09
Prpf31Q8CCF0 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC21.84■■□□□ 1.09
Prpf31Q8CCF0 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Prpf31Q8CCF0 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Prpf31Q8CCF0 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Prpf31Q8CCF0 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Prpf31Q8CCF0 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Prpf31Q8CCF0 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
Prpf31Q8CCF0 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Prpf31Q8CCF0 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC21.83■■□□□ 1.09
Prpf31Q8CCF0 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Prpf31Q8CCF0 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Prpf31Q8CCF0 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Prpf31Q8CCF0 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Prpf31Q8CCF0 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Prpf31Q8CCF0 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Prpf31Q8CCF0 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms