Protein–RNA interactions for Protein: Q8CC35

Synpo, Synaptopodin, mousemouse

Known RBP Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynpoQ8CC35 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SynpoQ8CC35 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SynpoQ8CC35 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SynpoQ8CC35 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.24■□□□□ 0.67
SynpoQ8CC35 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
SynpoQ8CC35 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SynpoQ8CC35 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SynpoQ8CC35 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
SynpoQ8CC35 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SynpoQ8CC35 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SynpoQ8CC35 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SynpoQ8CC35 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SynpoQ8CC35 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SynpoQ8CC35 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
SynpoQ8CC35 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SynpoQ8CC35 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SynpoQ8CC35 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
SynpoQ8CC35 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SynpoQ8CC35 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SynpoQ8CC35 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SynpoQ8CC35 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
SynpoQ8CC35 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SynpoQ8CC35 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SynpoQ8CC35 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC19.22■□□□□ 0.67
SynpoQ8CC35 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SynpoQ8CC35 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SynpoQ8CC35 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SynpoQ8CC35 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19.22■□□□□ 0.67
SynpoQ8CC35 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SynpoQ8CC35 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SynpoQ8CC35 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SynpoQ8CC35 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SynpoQ8CC35 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SynpoQ8CC35 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
SynpoQ8CC35 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SynpoQ8CC35 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC19.21■□□□□ 0.67
SynpoQ8CC35 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SynpoQ8CC35 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC19.21■□□□□ 0.67
SynpoQ8CC35 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SynpoQ8CC35 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SynpoQ8CC35 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.21■□□□□ 0.67
SynpoQ8CC35 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.21■□□□□ 0.67
SynpoQ8CC35 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SynpoQ8CC35 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SynpoQ8CC35 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SynpoQ8CC35 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SynpoQ8CC35 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
SynpoQ8CC35 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SynpoQ8CC35 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
SynpoQ8CC35 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SynpoQ8CC35 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SynpoQ8CC35 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
SynpoQ8CC35 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SynpoQ8CC35 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.19■□□□□ 0.66
SynpoQ8CC35 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SynpoQ8CC35 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SynpoQ8CC35 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC19.19■□□□□ 0.66
SynpoQ8CC35 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SynpoQ8CC35 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC19.19■□□□□ 0.66
SynpoQ8CC35 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
SynpoQ8CC35 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SynpoQ8CC35 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SynpoQ8CC35 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SynpoQ8CC35 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
SynpoQ8CC35 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SynpoQ8CC35 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SynpoQ8CC35 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
SynpoQ8CC35 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SynpoQ8CC35 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC19.18■□□□□ 0.66
SynpoQ8CC35 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.18■□□□□ 0.66
SynpoQ8CC35 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SynpoQ8CC35 Serp2-204ENSMUST00000228055 705 ntBASIC19.18■□□□□ 0.66
SynpoQ8CC35 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
SynpoQ8CC35 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SynpoQ8CC35 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SynpoQ8CC35 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SynpoQ8CC35 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SynpoQ8CC35 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SynpoQ8CC35 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
SynpoQ8CC35 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SynpoQ8CC35 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SynpoQ8CC35 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SynpoQ8CC35 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
SynpoQ8CC35 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.17■□□□□ 0.66
SynpoQ8CC35 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC19.17■□□□□ 0.66
SynpoQ8CC35 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
SynpoQ8CC35 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SynpoQ8CC35 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SynpoQ8CC35 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SynpoQ8CC35 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
SynpoQ8CC35 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
SynpoQ8CC35 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SynpoQ8CC35 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SynpoQ8CC35 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SynpoQ8CC35 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SynpoQ8CC35 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SynpoQ8CC35 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC19.16■□□□□ 0.66
SynpoQ8CC35 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SynpoQ8CC35 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SynpoQ8CC35 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms