Protein–RNA interactions for Protein: Q8BX13

Ube3d, E3 ubiquitin-protein ligase E3D, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3dQ8BX13 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ube3dQ8BX13 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ube3dQ8BX13 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ube3dQ8BX13 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
Ube3dQ8BX13 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Ube3dQ8BX13 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Ube3dQ8BX13 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ube3dQ8BX13 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Ube3dQ8BX13 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ube3dQ8BX13 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ube3dQ8BX13 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ube3dQ8BX13 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Ube3dQ8BX13 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ube3dQ8BX13 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ube3dQ8BX13 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ube3dQ8BX13 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ube3dQ8BX13 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC17.69■□□□□ 0.42
Ube3dQ8BX13 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ube3dQ8BX13 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ube3dQ8BX13 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Ube3dQ8BX13 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ube3dQ8BX13 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Ube3dQ8BX13 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ube3dQ8BX13 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ube3dQ8BX13 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ube3dQ8BX13 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Ube3dQ8BX13 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC17.69■□□□□ 0.42
Ube3dQ8BX13 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC17.69■□□□□ 0.42
Ube3dQ8BX13 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ube3dQ8BX13 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ube3dQ8BX13 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ube3dQ8BX13 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ube3dQ8BX13 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ube3dQ8BX13 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Ube3dQ8BX13 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ube3dQ8BX13 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ube3dQ8BX13 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ube3dQ8BX13 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ube3dQ8BX13 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ube3dQ8BX13 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ube3dQ8BX13 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ube3dQ8BX13 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ube3dQ8BX13 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ube3dQ8BX13 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ube3dQ8BX13 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
Ube3dQ8BX13 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ube3dQ8BX13 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ube3dQ8BX13 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ube3dQ8BX13 Gm9870-201ENSMUST00000063874 645 ntBASIC17.67■□□□□ 0.42
Ube3dQ8BX13 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ube3dQ8BX13 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ube3dQ8BX13 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ube3dQ8BX13 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ube3dQ8BX13 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ube3dQ8BX13 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ube3dQ8BX13 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ube3dQ8BX13 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Ube3dQ8BX13 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC17.66■□□□□ 0.42
Ube3dQ8BX13 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ube3dQ8BX13 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC17.66■□□□□ 0.42
Ube3dQ8BX13 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC17.66■□□□□ 0.42
Ube3dQ8BX13 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ube3dQ8BX13 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ube3dQ8BX13 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ube3dQ8BX13 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ube3dQ8BX13 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Ube3dQ8BX13 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ube3dQ8BX13 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ube3dQ8BX13 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC17.65■□□□□ 0.42
Ube3dQ8BX13 Appbp2os-202ENSMUST00000206972 447 ntBASIC17.65■□□□□ 0.42
Ube3dQ8BX13 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ube3dQ8BX13 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ube3dQ8BX13 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ube3dQ8BX13 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ube3dQ8BX13 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ube3dQ8BX13 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ube3dQ8BX13 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ube3dQ8BX13 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Ube3dQ8BX13 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ube3dQ8BX13 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Ube3dQ8BX13 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ube3dQ8BX13 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
Ube3dQ8BX13 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ube3dQ8BX13 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ube3dQ8BX13 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ube3dQ8BX13 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC17.64■□□□□ 0.41
Ube3dQ8BX13 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ube3dQ8BX13 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ube3dQ8BX13 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ube3dQ8BX13 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ube3dQ8BX13 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ube3dQ8BX13 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ube3dQ8BX13 Gm12821-201ENSMUST00000120022 600 ntBASIC17.63■□□□□ 0.41
Ube3dQ8BX13 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ube3dQ8BX13 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ube3dQ8BX13 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ube3dQ8BX13 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC17.63■□□□□ 0.41
Ube3dQ8BX13 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Ube3dQ8BX13 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Ube3dQ8BX13 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms