Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 AC135637.1-201ENSMUST00000227750 365 ntBASIC17.24■□□□□ 0.35
Smg1Q8BKX6 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smg1Q8BKX6 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Smg1Q8BKX6 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smg1Q8BKX6 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smg1Q8BKX6 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smg1Q8BKX6 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC17.23■□□□□ 0.35
Smg1Q8BKX6 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smg1Q8BKX6 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smg1Q8BKX6 Mir5133-201ENSMUST00000174955 77 ntBASIC17.23■□□□□ 0.35
Smg1Q8BKX6 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Smg1Q8BKX6 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Smg1Q8BKX6 Gm13836-201ENSMUST00000121159 501 ntBASIC17.23■□□□□ 0.35
Smg1Q8BKX6 Gm20049-201ENSMUST00000219950 730 ntBASIC17.23■□□□□ 0.35
Smg1Q8BKX6 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smg1Q8BKX6 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smg1Q8BKX6 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
Smg1Q8BKX6 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Smg1Q8BKX6 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smg1Q8BKX6 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smg1Q8BKX6 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smg1Q8BKX6 AC166356.1-201ENSMUST00000228236 1426 ntBASIC17.22■□□□□ 0.35
Smg1Q8BKX6 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC17.22■□□□□ 0.35
Smg1Q8BKX6 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC17.22■□□□□ 0.35
Smg1Q8BKX6 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Smg1Q8BKX6 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC17.21■□□□□ 0.35
Smg1Q8BKX6 Gm37856-201ENSMUST00000191634 999 ntBASIC17.21■□□□□ 0.35
Smg1Q8BKX6 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smg1Q8BKX6 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smg1Q8BKX6 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
Smg1Q8BKX6 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Smg1Q8BKX6 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smg1Q8BKX6 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smg1Q8BKX6 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smg1Q8BKX6 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smg1Q8BKX6 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smg1Q8BKX6 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Smg1Q8BKX6 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Smg1Q8BKX6 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smg1Q8BKX6 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Smg1Q8BKX6 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Smg1Q8BKX6 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smg1Q8BKX6 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smg1Q8BKX6 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Smg1Q8BKX6 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
Smg1Q8BKX6 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smg1Q8BKX6 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smg1Q8BKX6 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Smg1Q8BKX6 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Smg1Q8BKX6 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smg1Q8BKX6 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC17.18■□□□□ 0.34
Smg1Q8BKX6 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Smg1Q8BKX6 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Smg1Q8BKX6 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smg1Q8BKX6 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC17.18■□□□□ 0.34
Smg1Q8BKX6 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smg1Q8BKX6 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Smg1Q8BKX6 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smg1Q8BKX6 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC17.17■□□□□ 0.34
Smg1Q8BKX6 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smg1Q8BKX6 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
Smg1Q8BKX6 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smg1Q8BKX6 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC17.17■□□□□ 0.34
Smg1Q8BKX6 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Smg1Q8BKX6 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smg1Q8BKX6 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smg1Q8BKX6 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC17.16■□□□□ 0.34
Smg1Q8BKX6 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC17.16■□□□□ 0.34
Smg1Q8BKX6 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Smg1Q8BKX6 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smg1Q8BKX6 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Smg1Q8BKX6 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Smg1Q8BKX6 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smg1Q8BKX6 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC17.16■□□□□ 0.34
Smg1Q8BKX6 Gm7514-201ENSMUST00000209475 934 ntBASIC17.16■□□□□ 0.34
Smg1Q8BKX6 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smg1Q8BKX6 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smg1Q8BKX6 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smg1Q8BKX6 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smg1Q8BKX6 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Smg1Q8BKX6 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC17.15■□□□□ 0.34
Smg1Q8BKX6 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Smg1Q8BKX6 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smg1Q8BKX6 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smg1Q8BKX6 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Smg1Q8BKX6 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smg1Q8BKX6 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smg1Q8BKX6 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smg1Q8BKX6 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Smg1Q8BKX6 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Smg1Q8BKX6 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC17.14■□□□□ 0.34
Smg1Q8BKX6 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Smg1Q8BKX6 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Smg1Q8BKX6 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC17.14■□□□□ 0.33
Smg1Q8BKX6 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Smg1Q8BKX6 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC17.14■□□□□ 0.33
Smg1Q8BKX6 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smg1Q8BKX6 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
Smg1Q8BKX6 Gm3807-201ENSMUST00000193520 1168 ntBASIC17.14■□□□□ 0.33
Smg1Q8BKX6 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms