Protein–RNA interactions for Protein: Q80XJ3

Ttc28, Tetratricopeptide repeat protein 28, mousemouse

Predictions only

Length 2,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28Q80XJ3 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ttc28Q80XJ3 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ttc28Q80XJ3 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ttc28Q80XJ3 AC137127.1-201ENSMUST00000213466 1078 ntBASIC17.01■□□□□ 0.31
Ttc28Q80XJ3 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
Ttc28Q80XJ3 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ttc28Q80XJ3 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ttc28Q80XJ3 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ttc28Q80XJ3 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ttc28Q80XJ3 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ttc28Q80XJ3 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC17.01■□□□□ 0.31
Ttc28Q80XJ3 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ttc28Q80XJ3 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ttc28Q80XJ3 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ttc28Q80XJ3 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ttc28Q80XJ3 AC130671.1-201ENSMUST00000227384 1237 ntBASIC17■□□□□ 0.31
Ttc28Q80XJ3 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC17■□□□□ 0.31
Ttc28Q80XJ3 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ttc28Q80XJ3 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ttc28Q80XJ3 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ttc28Q80XJ3 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ttc28Q80XJ3 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ttc28Q80XJ3 Gm7514-201ENSMUST00000209475 934 ntBASIC16.99■□□□□ 0.31
Ttc28Q80XJ3 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Ttc28Q80XJ3 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Ttc28Q80XJ3 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ttc28Q80XJ3 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ttc28Q80XJ3 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Ttc28Q80XJ3 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ttc28Q80XJ3 Gm42555-201ENSMUST00000199304 1039 ntBASIC16.99■□□□□ 0.31
Ttc28Q80XJ3 AC135963.1-201ENSMUST00000211640 717 ntBASIC16.99■□□□□ 0.31
Ttc28Q80XJ3 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ttc28Q80XJ3 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Ttc28Q80XJ3 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ttc28Q80XJ3 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ttc28Q80XJ3 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Ttc28Q80XJ3 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Ttc28Q80XJ3 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ttc28Q80XJ3 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Ttc28Q80XJ3 Mir5133-201ENSMUST00000174955 77 ntBASIC16.98■□□□□ 0.31
Ttc28Q80XJ3 Gm9988-201ENSMUST00000069786 435 ntBASIC16.98■□□□□ 0.31
Ttc28Q80XJ3 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ttc28Q80XJ3 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Ttc28Q80XJ3 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC16.97■□□□□ 0.31
Ttc28Q80XJ3 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Ttc28Q80XJ3 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ttc28Q80XJ3 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ttc28Q80XJ3 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
Ttc28Q80XJ3 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC16.97■□□□□ 0.31
Ttc28Q80XJ3 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Ttc28Q80XJ3 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC16.97■□□□□ 0.31
Ttc28Q80XJ3 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ttc28Q80XJ3 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ttc28Q80XJ3 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ttc28Q80XJ3 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ttc28Q80XJ3 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Ttc28Q80XJ3 Gm42418-201ENSMUST00000182010 1831 ntBASIC16.97■□□□□ 0.31
Ttc28Q80XJ3 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ttc28Q80XJ3 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ttc28Q80XJ3 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ttc28Q80XJ3 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Ttc28Q80XJ3 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Ttc28Q80XJ3 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC16.96■□□□□ 0.31
Ttc28Q80XJ3 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ttc28Q80XJ3 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Ttc28Q80XJ3 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Ttc28Q80XJ3 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC16.96■□□□□ 0.31
Ttc28Q80XJ3 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ttc28Q80XJ3 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC16.96■□□□□ 0.31
Ttc28Q80XJ3 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC16.96■□□□□ 0.31
Ttc28Q80XJ3 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ttc28Q80XJ3 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Ttc28Q80XJ3 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Ttc28Q80XJ3 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Ttc28Q80XJ3 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Ttc28Q80XJ3 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Ttc28Q80XJ3 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ttc28Q80XJ3 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ttc28Q80XJ3 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Ttc28Q80XJ3 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ttc28Q80XJ3 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ttc28Q80XJ3 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ttc28Q80XJ3 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ttc28Q80XJ3 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ttc28Q80XJ3 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ttc28Q80XJ3 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ttc28Q80XJ3 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Ttc28Q80XJ3 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ttc28Q80XJ3 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ttc28Q80XJ3 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ttc28Q80XJ3 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ttc28Q80XJ3 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ttc28Q80XJ3 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ttc28Q80XJ3 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ttc28Q80XJ3 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ttc28Q80XJ3 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ttc28Q80XJ3 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ttc28Q80XJ3 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ttc28Q80XJ3 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ttc28Q80XJ3 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms