Protein–RNA interactions for Protein: Q6DD96

Pcdhga7, Protocadherin gamma subfamily A, 7, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga7Q6DD96 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhga7Q6DD96 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Pcdhga7Q6DD96 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Pcdhga7Q6DD96 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhga7Q6DD96 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.39■□□□□ 0.69
Pcdhga7Q6DD96 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhga7Q6DD96 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhga7Q6DD96 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.39■□□□□ 0.69
Pcdhga7Q6DD96 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Pcdhga7Q6DD96 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhga7Q6DD96 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Pcdhga7Q6DD96 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhga7Q6DD96 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhga7Q6DD96 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhga7Q6DD96 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.38■□□□□ 0.69
Pcdhga7Q6DD96 Gm7143-201ENSMUST00000222811 859 ntBASIC19.38■□□□□ 0.69
Pcdhga7Q6DD96 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhga7Q6DD96 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Pcdhga7Q6DD96 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhga7Q6DD96 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.38■□□□□ 0.69
Pcdhga7Q6DD96 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
Pcdhga7Q6DD96 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhga7Q6DD96 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhga7Q6DD96 Gm18755-201ENSMUST00000218030 1099 ntBASIC19.37■□□□□ 0.69
Pcdhga7Q6DD96 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhga7Q6DD96 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhga7Q6DD96 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhga7Q6DD96 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhga7Q6DD96 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhga7Q6DD96 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhga7Q6DD96 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Pcdhga7Q6DD96 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhga7Q6DD96 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhga7Q6DD96 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhga7Q6DD96 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhga7Q6DD96 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhga7Q6DD96 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.36■□□□□ 0.69
Pcdhga7Q6DD96 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhga7Q6DD96 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhga7Q6DD96 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhga7Q6DD96 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhga7Q6DD96 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhga7Q6DD96 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Pcdhga7Q6DD96 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhga7Q6DD96 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhga7Q6DD96 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhga7Q6DD96 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Pcdhga7Q6DD96 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhga7Q6DD96 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhga7Q6DD96 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhga7Q6DD96 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhga7Q6DD96 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhga7Q6DD96 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Pcdhga7Q6DD96 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhga7Q6DD96 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhga7Q6DD96 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhga7Q6DD96 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhga7Q6DD96 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.34■□□□□ 0.69
Pcdhga7Q6DD96 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhga7Q6DD96 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhga7Q6DD96 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhga7Q6DD96 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdhga7Q6DD96 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdhga7Q6DD96 Gm38342-201ENSMUST00000195710 2980 ntBASIC19.33■□□□□ 0.69
Pcdhga7Q6DD96 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC19.33■□□□□ 0.68
Pcdhga7Q6DD96 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdhga7Q6DD96 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdhga7Q6DD96 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdhga7Q6DD96 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdhga7Q6DD96 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdhga7Q6DD96 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdhga7Q6DD96 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdhga7Q6DD96 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhga7Q6DD96 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Pcdhga7Q6DD96 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC19.32■□□□□ 0.68
Pcdhga7Q6DD96 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhga7Q6DD96 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Pcdhga7Q6DD96 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhga7Q6DD96 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhga7Q6DD96 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC19.32■□□□□ 0.68
Pcdhga7Q6DD96 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhga7Q6DD96 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.32■□□□□ 0.68
Pcdhga7Q6DD96 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19.32■□□□□ 0.68
Pcdhga7Q6DD96 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhga7Q6DD96 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhga7Q6DD96 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhga7Q6DD96 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhga7Q6DD96 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhga7Q6DD96 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhga7Q6DD96 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhga7Q6DD96 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.31■□□□□ 0.68
Pcdhga7Q6DD96 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Pcdhga7Q6DD96 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhga7Q6DD96 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhga7Q6DD96 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhga7Q6DD96 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC19.3■□□□□ 0.68
Pcdhga7Q6DD96 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.3■□□□□ 0.68
Pcdhga7Q6DD96 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhga7Q6DD96 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhga7Q6DD96 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms