Protein–RNA interactions for Protein: Q64727

Vcl, Vinculin, mousemouse

Known RBP Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VclQ64727 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VclQ64727 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
VclQ64727 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
VclQ64727 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.74
VclQ64727 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
VclQ64727 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
VclQ64727 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.64■□□□□ 0.73
VclQ64727 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
VclQ64727 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
VclQ64727 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
VclQ64727 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
VclQ64727 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
VclQ64727 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.63■□□□□ 0.73
VclQ64727 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
VclQ64727 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
VclQ64727 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC19.63■□□□□ 0.73
VclQ64727 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
VclQ64727 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
VclQ64727 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
VclQ64727 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VclQ64727 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
VclQ64727 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VclQ64727 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VclQ64727 Mir6236-201ENSMUST00000184437 123 ntBASIC19.62■□□□□ 0.73
VclQ64727 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC19.62■□□□□ 0.73
VclQ64727 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VclQ64727 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VclQ64727 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.62■□□□□ 0.73
VclQ64727 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VclQ64727 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VclQ64727 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
VclQ64727 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VclQ64727 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.61■□□□□ 0.73
VclQ64727 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VclQ64727 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
VclQ64727 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VclQ64727 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.61■□□□□ 0.73
VclQ64727 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
VclQ64727 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.61■□□□□ 0.73
VclQ64727 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VclQ64727 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
VclQ64727 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
VclQ64727 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.6■□□□□ 0.73
VclQ64727 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
VclQ64727 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
VclQ64727 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
VclQ64727 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
VclQ64727 Gm15039-201ENSMUST00000118914 875 ntBASIC19.6■□□□□ 0.73
VclQ64727 Gm45417-201ENSMUST00000209533 758 ntBASIC19.6■□□□□ 0.73
VclQ64727 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
VclQ64727 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
VclQ64727 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
VclQ64727 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
VclQ64727 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
VclQ64727 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
VclQ64727 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
VclQ64727 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
VclQ64727 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
VclQ64727 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
VclQ64727 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.59■□□□□ 0.73
VclQ64727 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.59■□□□□ 0.73
VclQ64727 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
VclQ64727 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
VclQ64727 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
VclQ64727 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
VclQ64727 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
VclQ64727 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
VclQ64727 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.58■□□□□ 0.72
VclQ64727 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
VclQ64727 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.58■□□□□ 0.72
VclQ64727 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
VclQ64727 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
VclQ64727 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
VclQ64727 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
VclQ64727 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
VclQ64727 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
VclQ64727 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC19.57■□□□□ 0.72
VclQ64727 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
VclQ64727 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC19.57■□□□□ 0.72
VclQ64727 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
VclQ64727 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
VclQ64727 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
VclQ64727 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
VclQ64727 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
VclQ64727 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
VclQ64727 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
VclQ64727 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
VclQ64727 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
VclQ64727 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
VclQ64727 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
VclQ64727 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
VclQ64727 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
VclQ64727 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.55■□□□□ 0.72
VclQ64727 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
VclQ64727 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
VclQ64727 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
VclQ64727 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
VclQ64727 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
VclQ64727 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
VclQ64727 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms