Protein–RNA interactions for Protein: Q61009

Scarb1, Scavenger receptor class B member 1, mousemouse

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scarb1Q61009 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Scarb1Q61009 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC16.79■□□□□ 0.28
Scarb1Q61009 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scarb1Q61009 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Scarb1Q61009 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scarb1Q61009 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scarb1Q61009 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scarb1Q61009 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scarb1Q61009 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Scarb1Q61009 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scarb1Q61009 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scarb1Q61009 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scarb1Q61009 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scarb1Q61009 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
Scarb1Q61009 Gm11847-201ENSMUST00000125165 1119 ntBASIC16.78■□□□□ 0.28
Scarb1Q61009 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC16.78■□□□□ 0.28
Scarb1Q61009 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
Scarb1Q61009 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Scarb1Q61009 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scarb1Q61009 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scarb1Q61009 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
Scarb1Q61009 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scarb1Q61009 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC16.78■□□□□ 0.28
Scarb1Q61009 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scarb1Q61009 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scarb1Q61009 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Scarb1Q61009 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Scarb1Q61009 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC16.77■□□□□ 0.28
Scarb1Q61009 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Scarb1Q61009 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC16.77■□□□□ 0.28
Scarb1Q61009 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Scarb1Q61009 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Scarb1Q61009 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC16.77■□□□□ 0.27
Scarb1Q61009 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Scarb1Q61009 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
Scarb1Q61009 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Scarb1Q61009 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Scarb1Q61009 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scarb1Q61009 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Scarb1Q61009 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scarb1Q61009 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Scarb1Q61009 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Scarb1Q61009 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Scarb1Q61009 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Scarb1Q61009 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Scarb1Q61009 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scarb1Q61009 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scarb1Q61009 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scarb1Q61009 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scarb1Q61009 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scarb1Q61009 Gm28536-201ENSMUST00000190971 1317 ntBASIC16.74■□□□□ 0.27
Scarb1Q61009 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scarb1Q61009 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Scarb1Q61009 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scarb1Q61009 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC16.74■□□□□ 0.27
Scarb1Q61009 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC16.74■□□□□ 0.27
Scarb1Q61009 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scarb1Q61009 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Scarb1Q61009 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scarb1Q61009 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scarb1Q61009 Gm37035-201ENSMUST00000194809 2148 ntBASIC16.73■□□□□ 0.27
Scarb1Q61009 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scarb1Q61009 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scarb1Q61009 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scarb1Q61009 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scarb1Q61009 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scarb1Q61009 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scarb1Q61009 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scarb1Q61009 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scarb1Q61009 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scarb1Q61009 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scarb1Q61009 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scarb1Q61009 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Scarb1Q61009 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scarb1Q61009 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Scarb1Q61009 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scarb1Q61009 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scarb1Q61009 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scarb1Q61009 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Scarb1Q61009 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scarb1Q61009 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Scarb1Q61009 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Scarb1Q61009 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC16.72■□□□□ 0.27
Scarb1Q61009 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scarb1Q61009 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC16.72■□□□□ 0.27
Scarb1Q61009 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Scarb1Q61009 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Scarb1Q61009 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Scarb1Q61009 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Scarb1Q61009 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Scarb1Q61009 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Scarb1Q61009 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Scarb1Q61009 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Scarb1Q61009 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Scarb1Q61009 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Scarb1Q61009 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scarb1Q61009 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scarb1Q61009 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scarb1Q61009 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Scarb1Q61009 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms