Protein–RNA interactions for Protein: Q3V2L0

Defb28, Beta-defensin, mousemouse

Predictions only

Length 89 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Defb28Q3V2L0 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Defb28Q3V2L0 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Defb28Q3V2L0 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Defb28Q3V2L0 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Defb28Q3V2L0 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Defb28Q3V2L0 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Defb28Q3V2L0 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Defb28Q3V2L0 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Defb28Q3V2L0 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Defb28Q3V2L0 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC19.45■□□□□ 0.7
Defb28Q3V2L0 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Defb28Q3V2L0 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Defb28Q3V2L0 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Defb28Q3V2L0 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Defb28Q3V2L0 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Defb28Q3V2L0 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Defb28Q3V2L0 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC19.44■□□□□ 0.7
Defb28Q3V2L0 Gm22325-201ENSMUST00000158904 308 ntBASIC19.44■□□□□ 0.7
Defb28Q3V2L0 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC19.44■□□□□ 0.7
Defb28Q3V2L0 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Defb28Q3V2L0 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Defb28Q3V2L0 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Defb28Q3V2L0 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Defb28Q3V2L0 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Defb28Q3V2L0 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Defb28Q3V2L0 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Defb28Q3V2L0 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC19.42■□□□□ 0.7
Defb28Q3V2L0 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Defb28Q3V2L0 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC19.42■□□□□ 0.7
Defb28Q3V2L0 Mir6236-201ENSMUST00000184437 123 ntBASIC19.42■□□□□ 0.7
Defb28Q3V2L0 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Defb28Q3V2L0 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Defb28Q3V2L0 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Defb28Q3V2L0 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Defb28Q3V2L0 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Defb28Q3V2L0 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Defb28Q3V2L0 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Defb28Q3V2L0 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Defb28Q3V2L0 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Defb28Q3V2L0 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Defb28Q3V2L0 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
Defb28Q3V2L0 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.41■□□□□ 0.7
Defb28Q3V2L0 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Defb28Q3V2L0 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Defb28Q3V2L0 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Defb28Q3V2L0 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Defb28Q3V2L0 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.41■□□□□ 0.7
Defb28Q3V2L0 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Defb28Q3V2L0 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Defb28Q3V2L0 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Defb28Q3V2L0 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Defb28Q3V2L0 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Defb28Q3V2L0 Gm12527-201ENSMUST00000117967 564 ntBASIC19.4■□□□□ 0.7
Defb28Q3V2L0 Mir7071-201ENSMUST00000184847 69 ntBASIC19.4■□□□□ 0.7
Defb28Q3V2L0 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Defb28Q3V2L0 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Defb28Q3V2L0 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Defb28Q3V2L0 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Defb28Q3V2L0 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Defb28Q3V2L0 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Defb28Q3V2L0 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Defb28Q3V2L0 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC19.39■□□□□ 0.69
Defb28Q3V2L0 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Defb28Q3V2L0 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Defb28Q3V2L0 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Defb28Q3V2L0 H3f3aos-201ENSMUST00000097448 2905 ntBASIC19.38■□□□□ 0.69
Defb28Q3V2L0 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Defb28Q3V2L0 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Defb28Q3V2L0 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Defb28Q3V2L0 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Defb28Q3V2L0 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Defb28Q3V2L0 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Defb28Q3V2L0 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Defb28Q3V2L0 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.38■□□□□ 0.69
Defb28Q3V2L0 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC19.37■□□□□ 0.69
Defb28Q3V2L0 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Defb28Q3V2L0 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.37■□□□□ 0.69
Defb28Q3V2L0 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Defb28Q3V2L0 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC19.37■□□□□ 0.69
Defb28Q3V2L0 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Defb28Q3V2L0 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Defb28Q3V2L0 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Defb28Q3V2L0 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Defb28Q3V2L0 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Defb28Q3V2L0 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Defb28Q3V2L0 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Defb28Q3V2L0 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC19.36■□□□□ 0.69
Defb28Q3V2L0 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Defb28Q3V2L0 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Defb28Q3V2L0 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Defb28Q3V2L0 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC19.35■□□□□ 0.69
Defb28Q3V2L0 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Defb28Q3V2L0 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Defb28Q3V2L0 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.35■□□□□ 0.69
Defb28Q3V2L0 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Defb28Q3V2L0 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Defb28Q3V2L0 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Defb28Q3V2L0 Gm5408-201ENSMUST00000197998 747 ntBASIC19.34■□□□□ 0.69
Defb28Q3V2L0 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Defb28Q3V2L0 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms