Protein–RNA interactions for Protein: Q3UHC0

Tnrc6c, Trinucleotide repeat-containing gene 6C protein, mousemouse

Known RBP Predictions only

Length 1,690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnrc6cQ3UHC0 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Tnrc6cQ3UHC0 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC26.27■■□□□ 1.8
Tnrc6cQ3UHC0 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC26.27■■□□□ 1.8
Tnrc6cQ3UHC0 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
Tnrc6cQ3UHC0 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC26.27■■□□□ 1.8
Tnrc6cQ3UHC0 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Tnrc6cQ3UHC0 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
Tnrc6cQ3UHC0 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
Tnrc6cQ3UHC0 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Tnrc6cQ3UHC0 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Tnrc6cQ3UHC0 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC26.25■■□□□ 1.79
Tnrc6cQ3UHC0 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Tnrc6cQ3UHC0 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
Tnrc6cQ3UHC0 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
Tnrc6cQ3UHC0 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Tnrc6cQ3UHC0 Gm20049-201ENSMUST00000219950 730 ntBASIC26.25■■□□□ 1.79
Tnrc6cQ3UHC0 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Tnrc6cQ3UHC0 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Tnrc6cQ3UHC0 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
Tnrc6cQ3UHC0 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Tnrc6cQ3UHC0 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC26.24■■□□□ 1.79
Tnrc6cQ3UHC0 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Tnrc6cQ3UHC0 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Tnrc6cQ3UHC0 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC26.24■■□□□ 1.79
Tnrc6cQ3UHC0 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Tnrc6cQ3UHC0 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC26.23■■□□□ 1.79
Tnrc6cQ3UHC0 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Tnrc6cQ3UHC0 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
Tnrc6cQ3UHC0 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC26.23■■□□□ 1.79
Tnrc6cQ3UHC0 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC26.23■■□□□ 1.79
Tnrc6cQ3UHC0 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
Tnrc6cQ3UHC0 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC26.23■■□□□ 1.79
Tnrc6cQ3UHC0 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Tnrc6cQ3UHC0 AC135637.1-201ENSMUST00000227750 365 ntBASIC26.23■■□□□ 1.79
Tnrc6cQ3UHC0 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Tnrc6cQ3UHC0 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Tnrc6cQ3UHC0 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Tnrc6cQ3UHC0 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Tnrc6cQ3UHC0 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Tnrc6cQ3UHC0 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
Tnrc6cQ3UHC0 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Tnrc6cQ3UHC0 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Tnrc6cQ3UHC0 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
Tnrc6cQ3UHC0 Mir6982-201ENSMUST00000184354 68 ntBASIC26.22■■□□□ 1.79
Tnrc6cQ3UHC0 Gm37856-201ENSMUST00000191634 999 ntBASIC26.22■■□□□ 1.79
Tnrc6cQ3UHC0 Gm3807-201ENSMUST00000193520 1168 ntBASIC26.22■■□□□ 1.79
Tnrc6cQ3UHC0 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Tnrc6cQ3UHC0 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Tnrc6cQ3UHC0 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Tnrc6cQ3UHC0 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC26.21■■□□□ 1.79
Tnrc6cQ3UHC0 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC26.21■■□□□ 1.79
Tnrc6cQ3UHC0 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Tnrc6cQ3UHC0 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Tnrc6cQ3UHC0 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC26.2■■□□□ 1.78
Tnrc6cQ3UHC0 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC26.2■■□□□ 1.78
Tnrc6cQ3UHC0 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.78
Tnrc6cQ3UHC0 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
Tnrc6cQ3UHC0 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC26.19■■□□□ 1.78
Tnrc6cQ3UHC0 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Tnrc6cQ3UHC0 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Tnrc6cQ3UHC0 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Tnrc6cQ3UHC0 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC26.19■■□□□ 1.78
Tnrc6cQ3UHC0 Il17rd-202ENSMUST00000223942 2186 ntBASIC26.19■■□□□ 1.78
Tnrc6cQ3UHC0 Gm13181-201ENSMUST00000120117 1069 ntBASIC26.19■■□□□ 1.78
Tnrc6cQ3UHC0 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC26.19■■□□□ 1.78
Tnrc6cQ3UHC0 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC26.19■■□□□ 1.78
Tnrc6cQ3UHC0 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Tnrc6cQ3UHC0 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC26.18■■□□□ 1.78
Tnrc6cQ3UHC0 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC26.18■■□□□ 1.78
Tnrc6cQ3UHC0 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC26.18■■□□□ 1.78
Tnrc6cQ3UHC0 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Tnrc6cQ3UHC0 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Tnrc6cQ3UHC0 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC26.17■■□□□ 1.78
Tnrc6cQ3UHC0 AC122769.4-201ENSMUST00000228166 901 ntBASIC26.17■■□□□ 1.78
Tnrc6cQ3UHC0 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC26.17■■□□□ 1.78
Tnrc6cQ3UHC0 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Tnrc6cQ3UHC0 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC26.16■■□□□ 1.78
Tnrc6cQ3UHC0 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
Tnrc6cQ3UHC0 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC26.16■■□□□ 1.78
Tnrc6cQ3UHC0 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Tnrc6cQ3UHC0 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC26.16■■□□□ 1.78
Tnrc6cQ3UHC0 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC26.15■■□□□ 1.78
Tnrc6cQ3UHC0 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Tnrc6cQ3UHC0 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC26.15■■□□□ 1.78
Tnrc6cQ3UHC0 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Tnrc6cQ3UHC0 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC26.15■■□□□ 1.78
Tnrc6cQ3UHC0 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Tnrc6cQ3UHC0 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC26.15■■□□□ 1.78
Tnrc6cQ3UHC0 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC26.15■■□□□ 1.78
Tnrc6cQ3UHC0 Gm6211-202ENSMUST00000167849 925 ntBASIC26.15■■□□□ 1.78
Tnrc6cQ3UHC0 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Tnrc6cQ3UHC0 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Tnrc6cQ3UHC0 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
Tnrc6cQ3UHC0 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC26.14■■□□□ 1.78
Tnrc6cQ3UHC0 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC26.14■■□□□ 1.78
Tnrc6cQ3UHC0 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC26.14■■□□□ 1.77
Tnrc6cQ3UHC0 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Tnrc6cQ3UHC0 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC26.13■■□□□ 1.77
Tnrc6cQ3UHC0 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
Tnrc6cQ3UHC0 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms