Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cul4aQ3TCH7 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cul4aQ3TCH7 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Cul4aQ3TCH7 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC21.07■□□□□ 0.96
Cul4aQ3TCH7 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Cul4aQ3TCH7 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC21.07■□□□□ 0.96
Cul4aQ3TCH7 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Cul4aQ3TCH7 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC21.07■□□□□ 0.96
Cul4aQ3TCH7 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cul4aQ3TCH7 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cul4aQ3TCH7 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Cul4aQ3TCH7 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cul4aQ3TCH7 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cul4aQ3TCH7 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cul4aQ3TCH7 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Cul4aQ3TCH7 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Cul4aQ3TCH7 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cul4aQ3TCH7 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Cul4aQ3TCH7 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cul4aQ3TCH7 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC21.05■□□□□ 0.96
Cul4aQ3TCH7 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Cul4aQ3TCH7 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cul4aQ3TCH7 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Cul4aQ3TCH7 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Cul4aQ3TCH7 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cul4aQ3TCH7 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Cul4aQ3TCH7 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cul4aQ3TCH7 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cul4aQ3TCH7 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC21.05■□□□□ 0.96
Cul4aQ3TCH7 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cul4aQ3TCH7 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cul4aQ3TCH7 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Cul4aQ3TCH7 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cul4aQ3TCH7 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cul4aQ3TCH7 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cul4aQ3TCH7 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cul4aQ3TCH7 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cul4aQ3TCH7 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Cul4aQ3TCH7 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Cul4aQ3TCH7 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cul4aQ3TCH7 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC21.03■□□□□ 0.96
Cul4aQ3TCH7 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cul4aQ3TCH7 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Cul4aQ3TCH7 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cul4aQ3TCH7 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Cul4aQ3TCH7 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cul4aQ3TCH7 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cul4aQ3TCH7 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cul4aQ3TCH7 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC21.02■□□□□ 0.96
Cul4aQ3TCH7 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cul4aQ3TCH7 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Cul4aQ3TCH7 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cul4aQ3TCH7 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC21.02■□□□□ 0.95
Cul4aQ3TCH7 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Cul4aQ3TCH7 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Cul4aQ3TCH7 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Cul4aQ3TCH7 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
Cul4aQ3TCH7 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cul4aQ3TCH7 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cul4aQ3TCH7 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Cul4aQ3TCH7 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Cul4aQ3TCH7 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Cul4aQ3TCH7 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cul4aQ3TCH7 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cul4aQ3TCH7 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC21.01■□□□□ 0.95
Cul4aQ3TCH7 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cul4aQ3TCH7 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Cul4aQ3TCH7 AC124392.1-201ENSMUST00000225172 5324 ntBASIC21■□□□□ 0.95
Cul4aQ3TCH7 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
Cul4aQ3TCH7 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC21■□□□□ 0.95
Cul4aQ3TCH7 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cul4aQ3TCH7 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC21■□□□□ 0.95
Cul4aQ3TCH7 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Cul4aQ3TCH7 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC21■□□□□ 0.95
Cul4aQ3TCH7 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cul4aQ3TCH7 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Cul4aQ3TCH7 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cul4aQ3TCH7 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC21■□□□□ 0.95
Cul4aQ3TCH7 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cul4aQ3TCH7 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
Cul4aQ3TCH7 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cul4aQ3TCH7 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Cul4aQ3TCH7 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cul4aQ3TCH7 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Cul4aQ3TCH7 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.99■□□□□ 0.95
Cul4aQ3TCH7 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cul4aQ3TCH7 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Cul4aQ3TCH7 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cul4aQ3TCH7 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cul4aQ3TCH7 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Cul4aQ3TCH7 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cul4aQ3TCH7 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cul4aQ3TCH7 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.99■□□□□ 0.95
Cul4aQ3TCH7 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cul4aQ3TCH7 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cul4aQ3TCH7 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.99■□□□□ 0.95
Cul4aQ3TCH7 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cul4aQ3TCH7 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cul4aQ3TCH7 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cul4aQ3TCH7 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 71.3 ms