Protein–RNA interactions for Protein: P97471

Smad4, Mothers against decapentaplegic homolog 4, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smad4P97471 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Smad4P97471 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC20.35■□□□□ 0.85
Smad4P97471 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Smad4P97471 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Smad4P97471 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Smad4P97471 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Smad4P97471 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Smad4P97471 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Smad4P97471 AC135637.1-201ENSMUST00000227750 365 ntBASIC20.34■□□□□ 0.85
Smad4P97471 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
Smad4P97471 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Smad4P97471 Gm43859-201ENSMUST00000200075 1412 ntBASIC20.34■□□□□ 0.85
Smad4P97471 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Smad4P97471 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Smad4P97471 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Smad4P97471 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Smad4P97471 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.33■□□□□ 0.85
Smad4P97471 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Smad4P97471 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Smad4P97471 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC20.33■□□□□ 0.85
Smad4P97471 Gm20049-201ENSMUST00000219950 730 ntBASIC20.33■□□□□ 0.85
Smad4P97471 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Smad4P97471 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Smad4P97471 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Smad4P97471 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Smad4P97471 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Smad4P97471 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Smad4P97471 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Smad4P97471 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Smad4P97471 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC20.32■□□□□ 0.84
Smad4P97471 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Smad4P97471 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC20.32■□□□□ 0.84
Smad4P97471 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Smad4P97471 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Smad4P97471 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Smad4P97471 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Smad4P97471 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Smad4P97471 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Smad4P97471 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Smad4P97471 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC20.31■□□□□ 0.84
Smad4P97471 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC20.31■□□□□ 0.84
Smad4P97471 Mir6982-201ENSMUST00000184354 68 ntBASIC20.31■□□□□ 0.84
Smad4P97471 Mir6236-201ENSMUST00000184437 123 ntBASIC20.31■□□□□ 0.84
Smad4P97471 AC135963.1-201ENSMUST00000211640 717 ntBASIC20.31■□□□□ 0.84
Smad4P97471 AC153890.1-201ENSMUST00000220021 2469 ntBASIC20.31■□□□□ 0.84
Smad4P97471 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Smad4P97471 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Smad4P97471 Gm10571-201ENSMUST00000097869 1638 ntBASIC20.31■□□□□ 0.84
Smad4P97471 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Smad4P97471 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC20.3■□□□□ 0.84
Smad4P97471 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Smad4P97471 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Smad4P97471 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC20.3■□□□□ 0.84
Smad4P97471 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Smad4P97471 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Smad4P97471 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Smad4P97471 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC20.3■□□□□ 0.84
Smad4P97471 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Smad4P97471 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Smad4P97471 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.29■□□□□ 0.84
Smad4P97471 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Smad4P97471 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC20.29■□□□□ 0.84
Smad4P97471 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC20.29■□□□□ 0.84
Smad4P97471 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Smad4P97471 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Smad4P97471 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Smad4P97471 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Smad4P97471 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC20.28■□□□□ 0.84
Smad4P97471 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Smad4P97471 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smad4P97471 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Smad4P97471 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Smad4P97471 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Smad4P97471 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC20.27■□□□□ 0.84
Smad4P97471 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Smad4P97471 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Smad4P97471 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Smad4P97471 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Smad4P97471 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smad4P97471 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.26■□□□□ 0.83
Smad4P97471 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC20.26■□□□□ 0.83
Smad4P97471 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC20.26■□□□□ 0.83
Smad4P97471 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC20.26■□□□□ 0.83
Smad4P97471 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.26■□□□□ 0.83
Smad4P97471 Gm6365-201ENSMUST00000054711 744 ntBASIC20.26■□□□□ 0.83
Smad4P97471 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smad4P97471 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smad4P97471 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.26■□□□□ 0.83
Smad4P97471 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Smad4P97471 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Smad4P97471 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Smad4P97471 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Smad4P97471 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Smad4P97471 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Smad4P97471 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Smad4P97471 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Smad4P97471 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Smad4P97471 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Smad4P97471 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Smad4P97471 Gm37856-201ENSMUST00000191634 999 ntBASIC20.24■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms