Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC19.88■□□□□ 0.77
Shox2P70390 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC19.88■□□□□ 0.77
Shox2P70390 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Shox2P70390 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Shox2P70390 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC19.88■□□□□ 0.77
Shox2P70390 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Shox2P70390 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC19.88■□□□□ 0.77
Shox2P70390 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Shox2P70390 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Shox2P70390 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Shox2P70390 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Shox2P70390 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
Shox2P70390 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Shox2P70390 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Shox2P70390 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Shox2P70390 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Shox2P70390 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Shox2P70390 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Shox2P70390 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Shox2P70390 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Shox2P70390 Gm35558-201ENSMUST00000222675 2219 ntBASIC19.87■□□□□ 0.77
Shox2P70390 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Shox2P70390 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Shox2P70390 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.86■□□□□ 0.77
Shox2P70390 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Shox2P70390 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Shox2P70390 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Shox2P70390 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC19.86■□□□□ 0.77
Shox2P70390 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.86■□□□□ 0.77
Shox2P70390 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Shox2P70390 Fam105a-203ENSMUST00000226170 3043 ntBASIC19.86■□□□□ 0.77
Shox2P70390 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Shox2P70390 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Shox2P70390 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Shox2P70390 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Shox2P70390 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Shox2P70390 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Shox2P70390 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Shox2P70390 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Shox2P70390 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.85■□□□□ 0.77
Shox2P70390 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Shox2P70390 Rarb-207ENSMUST00000225921 2756 ntBASIC19.85■□□□□ 0.77
Shox2P70390 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Shox2P70390 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Shox2P70390 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Shox2P70390 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC19.84■□□□□ 0.77
Shox2P70390 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Shox2P70390 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Shox2P70390 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC19.84■□□□□ 0.77
Shox2P70390 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Shox2P70390 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Shox2P70390 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Shox2P70390 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Shox2P70390 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Shox2P70390 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Shox2P70390 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Shox2P70390 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.83■□□□□ 0.77
Shox2P70390 AC151971.4-201ENSMUST00000214717 704 ntBASIC19.83■□□□□ 0.77
Shox2P70390 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Shox2P70390 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.76
Shox2P70390 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Shox2P70390 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Shox2P70390 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Shox2P70390 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Shox2P70390 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.83■□□□□ 0.76
Shox2P70390 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Shox2P70390 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Shox2P70390 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Shox2P70390 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Shox2P70390 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Shox2P70390 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC19.82■□□□□ 0.76
Shox2P70390 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Shox2P70390 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC19.82■□□□□ 0.76
Shox2P70390 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Shox2P70390 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Shox2P70390 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Shox2P70390 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Shox2P70390 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Shox2P70390 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Shox2P70390 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Shox2P70390 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Shox2P70390 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Shox2P70390 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Shox2P70390 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Shox2P70390 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Shox2P70390 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Shox2P70390 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Shox2P70390 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Shox2P70390 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Shox2P70390 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Shox2P70390 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Shox2P70390 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Shox2P70390 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Shox2P70390 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.8■□□□□ 0.76
Shox2P70390 Gm11599-201ENSMUST00000118720 878 ntBASIC19.8■□□□□ 0.76
Shox2P70390 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.8■□□□□ 0.76
Shox2P70390 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Shox2P70390 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Shox2P70390 Gm42900-201ENSMUST00000197184 2167 ntBASIC19.8■□□□□ 0.76
Shox2P70390 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms