Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cdkn2bP55271 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cdkn2bP55271 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cdkn2bP55271 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cdkn2bP55271 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.24■□□□□ 0.67
Cdkn2bP55271 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cdkn2bP55271 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cdkn2bP55271 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cdkn2bP55271 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cdkn2bP55271 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cdkn2bP55271 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cdkn2bP55271 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cdkn2bP55271 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.23■□□□□ 0.67
Cdkn2bP55271 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cdkn2bP55271 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cdkn2bP55271 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.22■□□□□ 0.67
Cdkn2bP55271 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cdkn2bP55271 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cdkn2bP55271 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cdkn2bP55271 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cdkn2bP55271 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cdkn2bP55271 Gm7143-201ENSMUST00000222811 859 ntBASIC19.22■□□□□ 0.67
Cdkn2bP55271 Gm5921-201ENSMUST00000075898 882 ntBASIC19.22■□□□□ 0.67
Cdkn2bP55271 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cdkn2bP55271 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cdkn2bP55271 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cdkn2bP55271 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cdkn2bP55271 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC19.21■□□□□ 0.67
Cdkn2bP55271 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.21■□□□□ 0.67
Cdkn2bP55271 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cdkn2bP55271 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
Cdkn2bP55271 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cdkn2bP55271 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cdkn2bP55271 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
Cdkn2bP55271 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.66
Cdkn2bP55271 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Cdkn2bP55271 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cdkn2bP55271 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.2■□□□□ 0.66
Cdkn2bP55271 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.2■□□□□ 0.66
Cdkn2bP55271 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cdkn2bP55271 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Cdkn2bP55271 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cdkn2bP55271 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cdkn2bP55271 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cdkn2bP55271 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.19■□□□□ 0.66
Cdkn2bP55271 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.19■□□□□ 0.66
Cdkn2bP55271 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cdkn2bP55271 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.19■□□□□ 0.66
Cdkn2bP55271 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cdkn2bP55271 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cdkn2bP55271 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Cdkn2bP55271 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cdkn2bP55271 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cdkn2bP55271 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cdkn2bP55271 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cdkn2bP55271 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.18■□□□□ 0.66
Cdkn2bP55271 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cdkn2bP55271 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cdkn2bP55271 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cdkn2bP55271 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
Cdkn2bP55271 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cdkn2bP55271 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cdkn2bP55271 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cdkn2bP55271 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cdkn2bP55271 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cdkn2bP55271 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cdkn2bP55271 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cdkn2bP55271 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cdkn2bP55271 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cdkn2bP55271 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Cdkn2bP55271 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.17■□□□□ 0.66
Cdkn2bP55271 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.17■□□□□ 0.66
Cdkn2bP55271 Gm10232-201ENSMUST00000089221 720 ntBASIC19.17■□□□□ 0.66
Cdkn2bP55271 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Cdkn2bP55271 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cdkn2bP55271 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cdkn2bP55271 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cdkn2bP55271 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cdkn2bP55271 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cdkn2bP55271 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Cdkn2bP55271 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cdkn2bP55271 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cdkn2bP55271 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cdkn2bP55271 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Cdkn2bP55271 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Cdkn2bP55271 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cdkn2bP55271 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.15■□□□□ 0.66
Cdkn2bP55271 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cdkn2bP55271 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cdkn2bP55271 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Cdkn2bP55271 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cdkn2bP55271 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cdkn2bP55271 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Cdkn2bP55271 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cdkn2bP55271 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cdkn2bP55271 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.14■□□□□ 0.65
Cdkn2bP55271 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cdkn2bP55271 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Cdkn2bP55271 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cdkn2bP55271 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms