Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC25.75■■□□□ 1.71
Msh6P54276 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC25.75■■□□□ 1.71
Msh6P54276 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC25.75■■□□□ 1.71
Msh6P54276 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
Msh6P54276 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC25.74■■□□□ 1.71
Msh6P54276 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Msh6P54276 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Msh6P54276 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
Msh6P54276 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Msh6P54276 Gm13042-201ENSMUST00000119244 1955 ntBASIC25.73■■□□□ 1.71
Msh6P54276 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
Msh6P54276 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Msh6P54276 Gm18671-201ENSMUST00000214826 683 ntBASIC25.73■■□□□ 1.71
Msh6P54276 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC25.73■■□□□ 1.71
Msh6P54276 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Msh6P54276 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Msh6P54276 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Msh6P54276 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Msh6P54276 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Msh6P54276 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC25.72■■□□□ 1.71
Msh6P54276 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC25.72■■□□□ 1.71
Msh6P54276 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC25.72■■□□□ 1.71
Msh6P54276 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC25.72■■□□□ 1.71
Msh6P54276 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC25.72■■□□□ 1.71
Msh6P54276 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC25.72■■□□□ 1.71
Msh6P54276 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Msh6P54276 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC25.71■■□□□ 1.71
Msh6P54276 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Msh6P54276 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC25.71■■□□□ 1.71
Msh6P54276 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC25.71■■□□□ 1.71
Msh6P54276 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC25.7■■□□□ 1.71
Msh6P54276 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC25.7■■□□□ 1.71
Msh6P54276 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Msh6P54276 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Msh6P54276 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC25.7■■□□□ 1.7
Msh6P54276 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Msh6P54276 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC25.69■■□□□ 1.7
Msh6P54276 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Msh6P54276 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC25.69■■□□□ 1.7
Msh6P54276 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Msh6P54276 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC25.69■■□□□ 1.7
Msh6P54276 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Msh6P54276 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Msh6P54276 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Msh6P54276 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Msh6P54276 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
Msh6P54276 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
Msh6P54276 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
Msh6P54276 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
Msh6P54276 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Msh6P54276 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Msh6P54276 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC25.68■■□□□ 1.7
Msh6P54276 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC25.68■■□□□ 1.7
Msh6P54276 Gm27045-201ENSMUST00000182145 1402 ntBASIC25.68■■□□□ 1.7
Msh6P54276 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Msh6P54276 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC25.68■■□□□ 1.7
Msh6P54276 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Msh6P54276 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
Msh6P54276 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Msh6P54276 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC25.67■■□□□ 1.7
Msh6P54276 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC25.67■■□□□ 1.7
Msh6P54276 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Msh6P54276 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
Msh6P54276 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Msh6P54276 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC25.66■■□□□ 1.7
Msh6P54276 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
Msh6P54276 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC25.66■■□□□ 1.7
Msh6P54276 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
Msh6P54276 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Msh6P54276 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
Msh6P54276 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Msh6P54276 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Msh6P54276 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
Msh6P54276 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Msh6P54276 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC25.64■■□□□ 1.7
Msh6P54276 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Msh6P54276 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
Msh6P54276 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
Msh6P54276 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
Msh6P54276 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC25.64■■□□□ 1.69
Msh6P54276 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
Msh6P54276 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
Msh6P54276 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC25.63■■□□□ 1.69
Msh6P54276 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC25.63■■□□□ 1.69
Msh6P54276 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Msh6P54276 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Msh6P54276 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Msh6P54276 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC25.62■■□□□ 1.69
Msh6P54276 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC25.62■■□□□ 1.69
Msh6P54276 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC25.62■■□□□ 1.69
Msh6P54276 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
Msh6P54276 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
Msh6P54276 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Msh6P54276 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
Msh6P54276 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Msh6P54276 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
Msh6P54276 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Msh6P54276 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
Msh6P54276 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
Msh6P54276 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms