Protein–RNA interactions for Protein: P52019

Sqle, Squalene monooxygenase, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SqleP52019 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SqleP52019 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SqleP52019 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
SqleP52019 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
SqleP52019 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
SqleP52019 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SqleP52019 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC21.97■■□□□ 1.11
SqleP52019 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC21.97■■□□□ 1.11
SqleP52019 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SqleP52019 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC21.97■■□□□ 1.11
SqleP52019 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
SqleP52019 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SqleP52019 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SqleP52019 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SqleP52019 Gm5408-201ENSMUST00000197998 747 ntBASIC21.96■■□□□ 1.11
SqleP52019 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC21.96■■□□□ 1.11
SqleP52019 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC21.96■■□□□ 1.11
SqleP52019 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC21.96■■□□□ 1.11
SqleP52019 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SqleP52019 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SqleP52019 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SqleP52019 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
SqleP52019 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
SqleP52019 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.11
SqleP52019 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SqleP52019 AC115037.1-201ENSMUST00000223391 2173 ntBASIC21.95■■□□□ 1.1
SqleP52019 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SqleP52019 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
SqleP52019 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
SqleP52019 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SqleP52019 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SqleP52019 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SqleP52019 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
SqleP52019 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
SqleP52019 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SqleP52019 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SqleP52019 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SqleP52019 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
SqleP52019 AC135963.1-201ENSMUST00000211640 717 ntBASIC21.94■■□□□ 1.1
SqleP52019 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SqleP52019 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SqleP52019 Gm7290-201ENSMUST00000104990 617 ntBASIC21.93■■□□□ 1.1
SqleP52019 Gm12918-201ENSMUST00000120234 636 ntBASIC21.93■■□□□ 1.1
SqleP52019 Gm15710-201ENSMUST00000121821 636 ntBASIC21.93■■□□□ 1.1
SqleP52019 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SqleP52019 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
SqleP52019 Gm5075-201ENSMUST00000196916 622 ntBASIC21.93■■□□□ 1.1
SqleP52019 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC21.93■■□□□ 1.1
SqleP52019 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC21.93■■□□□ 1.1
SqleP52019 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
SqleP52019 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC21.93■■□□□ 1.1
SqleP52019 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC21.93■■□□□ 1.1
SqleP52019 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
SqleP52019 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SqleP52019 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SqleP52019 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC21.92■■□□□ 1.1
SqleP52019 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SqleP52019 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC21.92■■□□□ 1.1
SqleP52019 Mir6982-201ENSMUST00000184354 68 ntBASIC21.92■■□□□ 1.1
SqleP52019 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC21.92■■□□□ 1.1
SqleP52019 AC135637.1-201ENSMUST00000227750 365 ntBASIC21.92■■□□□ 1.1
SqleP52019 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
SqleP52019 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC21.92■■□□□ 1.1
SqleP52019 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SqleP52019 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
SqleP52019 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SqleP52019 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SqleP52019 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SqleP52019 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SqleP52019 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
SqleP52019 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC21.91■■□□□ 1.1
SqleP52019 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
SqleP52019 Gm20049-201ENSMUST00000219950 730 ntBASIC21.91■■□□□ 1.1
SqleP52019 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SqleP52019 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SqleP52019 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
SqleP52019 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SqleP52019 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SqleP52019 Gm13148-201ENSMUST00000118892 745 ntBASIC21.9■■□□□ 1.1
SqleP52019 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SqleP52019 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SqleP52019 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SqleP52019 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SqleP52019 Gm43859-201ENSMUST00000200075 1412 ntBASIC21.89■■□□□ 1.1
SqleP52019 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
SqleP52019 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
SqleP52019 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC21.89■■□□□ 1.09
SqleP52019 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SqleP52019 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
SqleP52019 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
SqleP52019 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SqleP52019 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
SqleP52019 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC21.88■■□□□ 1.09
SqleP52019 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SqleP52019 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC21.88■■□□□ 1.09
SqleP52019 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC21.88■■□□□ 1.09
SqleP52019 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SqleP52019 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SqleP52019 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SqleP52019 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC21.88■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms