Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SftpbP50405 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
SftpbP50405 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SftpbP50405 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SftpbP50405 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SftpbP50405 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
SftpbP50405 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.45■□□□□ 0.87
SftpbP50405 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
SftpbP50405 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SftpbP50405 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SftpbP50405 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
SftpbP50405 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SftpbP50405 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
SftpbP50405 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SftpbP50405 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SftpbP50405 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.44■□□□□ 0.86
SftpbP50405 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
SftpbP50405 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
SftpbP50405 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC20.44■□□□□ 0.86
SftpbP50405 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SftpbP50405 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
SftpbP50405 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SftpbP50405 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SftpbP50405 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SftpbP50405 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SftpbP50405 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SftpbP50405 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
SftpbP50405 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SftpbP50405 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SftpbP50405 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC20.43■□□□□ 0.86
SftpbP50405 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SftpbP50405 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SftpbP50405 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
SftpbP50405 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SftpbP50405 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
SftpbP50405 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SftpbP50405 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SftpbP50405 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
SftpbP50405 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC20.42■□□□□ 0.86
SftpbP50405 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
SftpbP50405 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SftpbP50405 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SftpbP50405 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SftpbP50405 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
SftpbP50405 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC20.42■□□□□ 0.86
SftpbP50405 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SftpbP50405 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SftpbP50405 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SftpbP50405 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SftpbP50405 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SftpbP50405 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SftpbP50405 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SftpbP50405 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SftpbP50405 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SftpbP50405 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
SftpbP50405 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
SftpbP50405 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SftpbP50405 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC20.41■□□□□ 0.86
SftpbP50405 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
SftpbP50405 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SftpbP50405 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC20.41■□□□□ 0.86
SftpbP50405 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SftpbP50405 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SftpbP50405 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SftpbP50405 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SftpbP50405 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC20.4■□□□□ 0.86
SftpbP50405 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC20.4■□□□□ 0.86
SftpbP50405 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
SftpbP50405 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SftpbP50405 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
SftpbP50405 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
SftpbP50405 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
SftpbP50405 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
SftpbP50405 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SftpbP50405 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
SftpbP50405 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
SftpbP50405 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.39■□□□□ 0.85
SftpbP50405 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
SftpbP50405 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.39■□□□□ 0.85
SftpbP50405 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.39■□□□□ 0.85
SftpbP50405 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC20.39■□□□□ 0.85
SftpbP50405 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
SftpbP50405 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SftpbP50405 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SftpbP50405 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.38■□□□□ 0.85
SftpbP50405 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.38■□□□□ 0.85
SftpbP50405 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SftpbP50405 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SftpbP50405 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SftpbP50405 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SftpbP50405 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SftpbP50405 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SftpbP50405 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SftpbP50405 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SftpbP50405 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SftpbP50405 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SftpbP50405 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SftpbP50405 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SftpbP50405 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC20.36■□□□□ 0.85
SftpbP50405 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.36■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms