Protein–RNA interactions for Protein: P47806

Gli1, Zinc finger protein GLI1, mousemouse

Predictions only

Length 1,111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli1P47806 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gli1P47806 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gli1P47806 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.45■□□□□ 0.7
Gli1P47806 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gli1P47806 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.45■□□□□ 0.7
Gli1P47806 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gli1P47806 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gli1P47806 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gli1P47806 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gli1P47806 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gli1P47806 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Gli1P47806 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gli1P47806 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gli1P47806 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gli1P47806 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gli1P47806 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gli1P47806 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC19.44■□□□□ 0.7
Gli1P47806 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gli1P47806 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gli1P47806 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Gli1P47806 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Gli1P47806 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Gli1P47806 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gli1P47806 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Gli1P47806 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Gli1P47806 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gli1P47806 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gli1P47806 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gli1P47806 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.43■□□□□ 0.7
Gli1P47806 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gli1P47806 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Gli1P47806 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Gli1P47806 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gli1P47806 Gm21956-201ENSMUST00000179946 522 ntBASIC19.43■□□□□ 0.7
Gli1P47806 Gm40881-201ENSMUST00000223397 166 ntBASIC19.43■□□□□ 0.7
Gli1P47806 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gli1P47806 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Gli1P47806 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Gli1P47806 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Gli1P47806 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gli1P47806 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gli1P47806 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gli1P47806 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Gli1P47806 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gli1P47806 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Gli1P47806 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.42■□□□□ 0.7
Gli1P47806 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gli1P47806 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC19.42■□□□□ 0.7
Gli1P47806 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC19.42■□□□□ 0.7
Gli1P47806 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gli1P47806 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Gli1P47806 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gli1P47806 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Gli1P47806 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Gli1P47806 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.41■□□□□ 0.7
Gli1P47806 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gli1P47806 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gli1P47806 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.41■□□□□ 0.7
Gli1P47806 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gli1P47806 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gli1P47806 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gli1P47806 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.41■□□□□ 0.7
Gli1P47806 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.41■□□□□ 0.7
Gli1P47806 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC19.41■□□□□ 0.7
Gli1P47806 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.41■□□□□ 0.7
Gli1P47806 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gli1P47806 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gli1P47806 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gli1P47806 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gli1P47806 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Gli1P47806 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Gli1P47806 Gm11847-201ENSMUST00000125165 1119 ntBASIC19.4■□□□□ 0.7
Gli1P47806 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC19.4■□□□□ 0.7
Gli1P47806 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
Gli1P47806 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC19.4■□□□□ 0.7
Gli1P47806 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gli1P47806 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gli1P47806 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gli1P47806 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.39■□□□□ 0.7
Gli1P47806 Gm8093-201ENSMUST00000128935 1892 ntBASIC19.39■□□□□ 0.7
Gli1P47806 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Gli1P47806 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gli1P47806 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gli1P47806 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.39■□□□□ 0.69
Gli1P47806 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Gli1P47806 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.39■□□□□ 0.69
Gli1P47806 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Gli1P47806 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.39■□□□□ 0.69
Gli1P47806 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gli1P47806 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gli1P47806 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC19.38■□□□□ 0.69
Gli1P47806 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC19.38■□□□□ 0.69
Gli1P47806 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
Gli1P47806 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Gli1P47806 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gli1P47806 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Gli1P47806 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.38■□□□□ 0.69
Gli1P47806 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gli1P47806 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gli1P47806 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms