Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC31.29■■■□□ 2.6
Chd1P40201 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
Chd1P40201 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC31.29■■■□□ 2.6
Chd1P40201 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC31.29■■■□□ 2.6
Chd1P40201 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC31.28■■■□□ 2.6
Chd1P40201 Mir6982-201ENSMUST00000184354 68 ntBASIC31.28■■■□□ 2.6
Chd1P40201 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Chd1P40201 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC31.28■■■□□ 2.6
Chd1P40201 Gm13146-201ENSMUST00000118508 780 ntBASIC31.27■■■□□ 2.6
Chd1P40201 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Chd1P40201 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
Chd1P40201 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
Chd1P40201 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC31.27■■■□□ 2.6
Chd1P40201 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC31.27■■■□□ 2.6
Chd1P40201 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
Chd1P40201 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC31.26■■■□□ 2.6
Chd1P40201 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
Chd1P40201 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC31.26■■■□□ 2.59
Chd1P40201 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC31.26■■■□□ 2.59
Chd1P40201 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Chd1P40201 Gm7290-201ENSMUST00000104990 617 ntBASIC31.24■■■□□ 2.59
Chd1P40201 Gm12918-201ENSMUST00000120234 636 ntBASIC31.24■■■□□ 2.59
Chd1P40201 Gm15710-201ENSMUST00000121821 636 ntBASIC31.24■■■□□ 2.59
Chd1P40201 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC31.24■■■□□ 2.59
Chd1P40201 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
Chd1P40201 Gm5075-201ENSMUST00000196916 622 ntBASIC31.24■■■□□ 2.59
Chd1P40201 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC31.24■■■□□ 2.59
Chd1P40201 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC31.24■■■□□ 2.59
Chd1P40201 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
Chd1P40201 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
Chd1P40201 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Chd1P40201 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Chd1P40201 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC31.24■■■□□ 2.59
Chd1P40201 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC31.24■■■□□ 2.59
Chd1P40201 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC31.24■■■□□ 2.59
Chd1P40201 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Chd1P40201 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Chd1P40201 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Chd1P40201 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC31.23■■■□□ 2.59
Chd1P40201 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC31.23■■■□□ 2.59
Chd1P40201 Trmt13-210ENSMUST00000198454 880 ntBASIC31.23■■■□□ 2.59
Chd1P40201 CT010467.1-202ENSMUST00000205406 714 ntBASIC31.23■■■□□ 2.59
Chd1P40201 CT030146.1-201ENSMUST00000220919 217 ntBASIC31.23■■■□□ 2.59
Chd1P40201 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC31.23■■■□□ 2.59
Chd1P40201 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Chd1P40201 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
Chd1P40201 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
Chd1P40201 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
Chd1P40201 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
Chd1P40201 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC31.22■■■□□ 2.59
Chd1P40201 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
Chd1P40201 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
Chd1P40201 Gm44878-201ENSMUST00000205812 1295 ntBASIC31.21■■■□□ 2.59
Chd1P40201 Gm10571-201ENSMUST00000097869 1638 ntBASIC31.2■■■□□ 2.59
Chd1P40201 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC31.2■■■□□ 2.58
Chd1P40201 Gm13836-201ENSMUST00000121159 501 ntBASIC31.2■■■□□ 2.58
Chd1P40201 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC31.2■■■□□ 2.58
Chd1P40201 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC31.2■■■□□ 2.58
Chd1P40201 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC31.2■■■□□ 2.58
Chd1P40201 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
Chd1P40201 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
Chd1P40201 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC31.19■■■□□ 2.58
Chd1P40201 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
Chd1P40201 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC31.19■■■□□ 2.58
Chd1P40201 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC31.19■■■□□ 2.58
Chd1P40201 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC31.19■■■□□ 2.58
Chd1P40201 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC31.19■■■□□ 2.58
Chd1P40201 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
Chd1P40201 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Chd1P40201 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Chd1P40201 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC31.18■■■□□ 2.58
Chd1P40201 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC31.18■■■□□ 2.58
Chd1P40201 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Chd1P40201 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
Chd1P40201 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC31.17■■■□□ 2.58
Chd1P40201 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Chd1P40201 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC31.17■■■□□ 2.58
Chd1P40201 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC31.17■■■□□ 2.58
Chd1P40201 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Chd1P40201 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Chd1P40201 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Chd1P40201 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Chd1P40201 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
Chd1P40201 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC31.15■■■□□ 2.58
Chd1P40201 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC31.15■■■□□ 2.58
Chd1P40201 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC31.15■■■□□ 2.58
Chd1P40201 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC31.15■■■□□ 2.58
Chd1P40201 Gm42418-201ENSMUST00000182010 1831 ntBASIC31.14■■■□□ 2.58
Chd1P40201 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
Chd1P40201 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
Chd1P40201 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
Chd1P40201 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC31.14■■■□□ 2.57
Chd1P40201 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC31.13■■■□□ 2.57
Chd1P40201 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
Chd1P40201 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Chd1P40201 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Chd1P40201 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC31.12■■■□□ 2.57
Chd1P40201 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC31.12■■■□□ 2.57
Chd1P40201 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC31.12■■■□□ 2.57
Chd1P40201 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms