Protein–RNA interactions for Protein: P20293

T, Brachyury protein, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TP20293 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC18.73■□□□□ 0.59
TP20293 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
TP20293 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
TP20293 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
TP20293 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC18.73■□□□□ 0.59
TP20293 Gm10657-201ENSMUST00000193528 1031 ntBASIC18.73■□□□□ 0.59
TP20293 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
TP20293 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
TP20293 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
TP20293 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
TP20293 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TP20293 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TP20293 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TP20293 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TP20293 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
TP20293 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TP20293 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
TP20293 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TP20293 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
TP20293 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TP20293 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TP20293 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TP20293 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
TP20293 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TP20293 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC18.71■□□□□ 0.59
TP20293 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TP20293 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.71■□□□□ 0.59
TP20293 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TP20293 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TP20293 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
TP20293 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TP20293 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TP20293 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TP20293 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
TP20293 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TP20293 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TP20293 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TP20293 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TP20293 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TP20293 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC18.7■□□□□ 0.58
TP20293 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC18.7■□□□□ 0.58
TP20293 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TP20293 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC18.69■□□□□ 0.58
TP20293 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TP20293 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TP20293 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TP20293 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TP20293 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
TP20293 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TP20293 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TP20293 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TP20293 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TP20293 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TP20293 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TP20293 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC18.68■□□□□ 0.58
TP20293 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TP20293 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
TP20293 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TP20293 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TP20293 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TP20293 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TP20293 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TP20293 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TP20293 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TP20293 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC18.67■□□□□ 0.58
TP20293 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC18.67■□□□□ 0.58
TP20293 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC18.67■□□□□ 0.58
TP20293 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
TP20293 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TP20293 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TP20293 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TP20293 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TP20293 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TP20293 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TP20293 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TP20293 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC18.66■□□□□ 0.58
TP20293 Krt8-ps-201ENSMUST00000208495 945 ntBASIC18.66■□□□□ 0.58
TP20293 Golgb1-201ENSMUST00000023534 498 ntBASIC18.66■□□□□ 0.58
TP20293 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
TP20293 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TP20293 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TP20293 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
TP20293 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TP20293 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.65■□□□□ 0.58
TP20293 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TP20293 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
TP20293 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TP20293 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
TP20293 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TP20293 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
TP20293 Gm43530-201ENSMUST00000195920 274 ntBASIC18.65■□□□□ 0.58
TP20293 Gm9847-201ENSMUST00000052528 599 ntBASIC18.65■□□□□ 0.58
TP20293 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TP20293 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
TP20293 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TP20293 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TP20293 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TP20293 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
TP20293 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
TP20293 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms