Protein–RNA interactions for Protein: O88245

Gm10139, Mszf85 (Fragment), mousemouse

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10139O88245 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gm10139O88245 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Gm10139O88245 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC12.23□□□□□ -0.45
Gm10139O88245 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Gm10139O88245 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Gm10139O88245 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gm10139O88245 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gm10139O88245 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Gm10139O88245 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Gm10139O88245 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Gm10139O88245 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC12.23□□□□□ -0.45
Gm10139O88245 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC12.23□□□□□ -0.45
Gm10139O88245 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC12.23□□□□□ -0.45
Gm10139O88245 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC12.23□□□□□ -0.45
Gm10139O88245 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Gm10139O88245 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gm10139O88245 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC12.23□□□□□ -0.45
Gm10139O88245 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gm10139O88245 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gm10139O88245 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Gm10139O88245 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gm10139O88245 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gm10139O88245 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gm10139O88245 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Gm10139O88245 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC12.22□□□□□ -0.45
Gm10139O88245 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Gm10139O88245 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Gm10139O88245 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Gm10139O88245 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC12.22□□□□□ -0.45
Gm10139O88245 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Gm10139O88245 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Gm10139O88245 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
Gm10139O88245 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Gm10139O88245 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Gm10139O88245 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Gm10139O88245 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Gm10139O88245 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Gm10139O88245 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Gm10139O88245 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Gm10139O88245 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Gm10139O88245 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Gm10139O88245 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Gm10139O88245 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Gm10139O88245 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gm10139O88245 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gm10139O88245 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gm10139O88245 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Gm10139O88245 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
Gm10139O88245 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gm10139O88245 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gm10139O88245 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gm10139O88245 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Gm10139O88245 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gm10139O88245 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gm10139O88245 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gm10139O88245 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gm10139O88245 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Gm10139O88245 Gm43545-201ENSMUST00000196765 2779 ntBASIC12.19□□□□□ -0.46
Gm10139O88245 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm10139O88245 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm10139O88245 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm10139O88245 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm10139O88245 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Gm10139O88245 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm10139O88245 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Gm10139O88245 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Gm10139O88245 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm10139O88245 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm10139O88245 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm10139O88245 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm10139O88245 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Gm10139O88245 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm10139O88245 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Gm10139O88245 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Gm10139O88245 Mir6236-201ENSMUST00000184437 123 ntBASIC12.18□□□□□ -0.46
Gm10139O88245 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm10139O88245 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm10139O88245 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Gm10139O88245 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm10139O88245 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC12.18□□□□□ -0.46
Gm10139O88245 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm10139O88245 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm10139O88245 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Gm10139O88245 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC12.17□□□□□ -0.46
Gm10139O88245 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm10139O88245 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Gm10139O88245 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC12.17□□□□□ -0.46
Gm10139O88245 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC12.17□□□□□ -0.46
Gm10139O88245 Gm18755-201ENSMUST00000218030 1099 ntBASIC12.17□□□□□ -0.46
Gm10139O88245 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm10139O88245 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm10139O88245 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm10139O88245 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Gm10139O88245 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC12.16□□□□□ -0.46
Gm10139O88245 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm10139O88245 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Gm10139O88245 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Gm10139O88245 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC12.16□□□□□ -0.46
Gm10139O88245 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Gm10139O88245 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 13 ms