Protein–RNA interactions for Protein: O54991

Cntnap1, Contactin-associated protein 1, mousemouse

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntnap1O54991 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Cntnap1O54991 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Cntnap1O54991 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC26.61■■□□□ 1.85
Cntnap1O54991 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC26.61■■□□□ 1.85
Cntnap1O54991 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Cntnap1O54991 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
Cntnap1O54991 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC26.6■■□□□ 1.85
Cntnap1O54991 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Cntnap1O54991 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC26.6■■□□□ 1.85
Cntnap1O54991 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
Cntnap1O54991 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Cntnap1O54991 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC26.59■■□□□ 1.85
Cntnap1O54991 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Cntnap1O54991 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC26.59■■□□□ 1.85
Cntnap1O54991 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC26.59■■□□□ 1.85
Cntnap1O54991 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC26.59■■□□□ 1.85
Cntnap1O54991 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Cntnap1O54991 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Cntnap1O54991 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC26.58■■□□□ 1.85
Cntnap1O54991 Gm13146-201ENSMUST00000118508 780 ntBASIC26.58■■□□□ 1.85
Cntnap1O54991 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC26.58■■□□□ 1.85
Cntnap1O54991 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Cntnap1O54991 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Cntnap1O54991 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Cntnap1O54991 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Cntnap1O54991 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Cntnap1O54991 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Cntnap1O54991 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Cntnap1O54991 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC26.58■■□□□ 1.84
Cntnap1O54991 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC26.58■■□□□ 1.84
Cntnap1O54991 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC26.58■■□□□ 1.84
Cntnap1O54991 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.84
Cntnap1O54991 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Cntnap1O54991 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC26.57■■□□□ 1.84
Cntnap1O54991 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC26.57■■□□□ 1.84
Cntnap1O54991 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC26.57■■□□□ 1.84
Cntnap1O54991 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC26.57■■□□□ 1.84
Cntnap1O54991 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC26.57■■□□□ 1.84
Cntnap1O54991 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC26.57■■□□□ 1.84
Cntnap1O54991 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC26.57■■□□□ 1.84
Cntnap1O54991 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC26.57■■□□□ 1.84
Cntnap1O54991 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Cntnap1O54991 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC26.57■■□□□ 1.84
Cntnap1O54991 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
Cntnap1O54991 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
Cntnap1O54991 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Cntnap1O54991 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
Cntnap1O54991 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
Cntnap1O54991 Gm11643-201ENSMUST00000119578 864 ntBASIC26.55■■□□□ 1.84
Cntnap1O54991 Gm6576-201ENSMUST00000169678 883 ntBASIC26.55■■□□□ 1.84
Cntnap1O54991 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC26.54■■□□□ 1.84
Cntnap1O54991 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Cntnap1O54991 Gm715-201ENSMUST00000117865 831 ntBASIC26.54■■□□□ 1.84
Cntnap1O54991 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Cntnap1O54991 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC26.54■■□□□ 1.84
Cntnap1O54991 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Cntnap1O54991 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
Cntnap1O54991 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Cntnap1O54991 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC26.53■■□□□ 1.84
Cntnap1O54991 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Cntnap1O54991 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC26.52■■□□□ 1.84
Cntnap1O54991 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC26.52■■□□□ 1.84
Cntnap1O54991 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC26.52■■□□□ 1.84
Cntnap1O54991 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC26.52■■□□□ 1.84
Cntnap1O54991 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
Cntnap1O54991 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Cntnap1O54991 Gm15565-201ENSMUST00000118890 427 ntBASIC26.51■■□□□ 1.83
Cntnap1O54991 Gm26524-201ENSMUST00000192339 390 ntBASIC26.51■■□□□ 1.83
Cntnap1O54991 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC26.51■■□□□ 1.83
Cntnap1O54991 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC26.51■■□□□ 1.83
Cntnap1O54991 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
Cntnap1O54991 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC26.5■■□□□ 1.83
Cntnap1O54991 AL672049.1-201ENSMUST00000197943 91 ntBASIC26.5■■□□□ 1.83
Cntnap1O54991 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
Cntnap1O54991 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
Cntnap1O54991 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC26.5■■□□□ 1.83
Cntnap1O54991 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Cntnap1O54991 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC26.49■■□□□ 1.83
Cntnap1O54991 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Cntnap1O54991 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Cntnap1O54991 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC26.49■■□□□ 1.83
Cntnap1O54991 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Cntnap1O54991 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC26.49■■□□□ 1.83
Cntnap1O54991 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC26.48■■□□□ 1.83
Cntnap1O54991 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC26.48■■□□□ 1.83
Cntnap1O54991 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Cntnap1O54991 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Cntnap1O54991 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Cntnap1O54991 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
Cntnap1O54991 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
Cntnap1O54991 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Cntnap1O54991 Gm27275-201ENSMUST00000184318 272 ntBASIC26.47■■□□□ 1.83
Cntnap1O54991 Gm6420-201ENSMUST00000193885 723 ntBASIC26.47■■□□□ 1.83
Cntnap1O54991 Arhgef33-211ENSMUST00000225658 473 ntBASIC26.47■■□□□ 1.83
Cntnap1O54991 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC26.47■■□□□ 1.83
Cntnap1O54991 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Cntnap1O54991 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Cntnap1O54991 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC26.46■■□□□ 1.83
Cntnap1O54991 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC26.46■■□□□ 1.83
Cntnap1O54991 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms