Protein–RNA interactions for Protein: O35973

Per1, Period circadian protein homolog 1, mousemouse

Predictions only

Length 1,291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Per1O35973 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Per1O35973 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC21.92■■□□□ 1.1
Per1O35973 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC21.92■■□□□ 1.1
Per1O35973 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Per1O35973 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Per1O35973 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Per1O35973 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
Per1O35973 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC21.92■■□□□ 1.1
Per1O35973 Gm43017-201ENSMUST00000198296 752 ntBASIC21.92■■□□□ 1.1
Per1O35973 Gm21168-201ENSMUST00000199646 1096 ntBASIC21.92■■□□□ 1.1
Per1O35973 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Per1O35973 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Per1O35973 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Per1O35973 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Per1O35973 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Per1O35973 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC21.91■■□□□ 1.1
Per1O35973 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
Per1O35973 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Per1O35973 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC21.91■■□□□ 1.1
Per1O35973 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC21.91■■□□□ 1.1
Per1O35973 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Per1O35973 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Per1O35973 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Per1O35973 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC21.9■■□□□ 1.1
Per1O35973 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Per1O35973 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Per1O35973 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Per1O35973 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Per1O35973 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC21.9■■□□□ 1.1
Per1O35973 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Per1O35973 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
Per1O35973 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Per1O35973 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
Per1O35973 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Per1O35973 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Per1O35973 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Per1O35973 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Per1O35973 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Per1O35973 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.1
Per1O35973 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC21.89■■□□□ 1.09
Per1O35973 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC21.89■■□□□ 1.09
Per1O35973 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Per1O35973 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC21.89■■□□□ 1.09
Per1O35973 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Per1O35973 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC21.88■■□□□ 1.09
Per1O35973 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Per1O35973 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
Per1O35973 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Per1O35973 Smad6-203ENSMUST00000179458 273 ntBASIC21.88■■□□□ 1.09
Per1O35973 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Per1O35973 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Per1O35973 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Per1O35973 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Per1O35973 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC21.87■■□□□ 1.09
Per1O35973 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC21.87■■□□□ 1.09
Per1O35973 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Per1O35973 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
Per1O35973 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Per1O35973 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Per1O35973 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Per1O35973 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC21.86■■□□□ 1.09
Per1O35973 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
Per1O35973 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Per1O35973 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Per1O35973 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Per1O35973 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Per1O35973 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
Per1O35973 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Per1O35973 AC165080.2-201ENSMUST00000217491 1530 ntBASIC21.85■■□□□ 1.09
Per1O35973 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Per1O35973 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
Per1O35973 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Per1O35973 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Per1O35973 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Per1O35973 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
Per1O35973 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Per1O35973 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Per1O35973 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC21.84■■□□□ 1.09
Per1O35973 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Per1O35973 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Per1O35973 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.83■■□□□ 1.09
Per1O35973 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Per1O35973 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Per1O35973 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Per1O35973 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Per1O35973 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Per1O35973 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Per1O35973 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Per1O35973 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Per1O35973 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Per1O35973 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC21.83■■□□□ 1.08
Per1O35973 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
Per1O35973 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
Per1O35973 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Per1O35973 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC21.82■■□□□ 1.08
Per1O35973 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Per1O35973 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Per1O35973 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Per1O35973 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Per1O35973 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC21.81■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms