Protein–RNA interactions for Protein: O35595

Ptch2, Protein patched homolog 2, mousemouse

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch2O35595 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ptch2O35595 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.56■□□□□ 0.88
Ptch2O35595 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC20.56■□□□□ 0.88
Ptch2O35595 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ptch2O35595 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.56■□□□□ 0.88
Ptch2O35595 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ptch2O35595 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
Ptch2O35595 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ptch2O35595 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ptch2O35595 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Ptch2O35595 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Ptch2O35595 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ptch2O35595 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ptch2O35595 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ptch2O35595 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Ptch2O35595 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC20.55■□□□□ 0.88
Ptch2O35595 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ptch2O35595 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ptch2O35595 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ptch2O35595 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ptch2O35595 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC20.54■□□□□ 0.88
Ptch2O35595 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC20.54■□□□□ 0.88
Ptch2O35595 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ptch2O35595 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ptch2O35595 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ptch2O35595 Gm10493-201ENSMUST00000097270 612 ntBASIC20.54■□□□□ 0.88
Ptch2O35595 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ptch2O35595 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ptch2O35595 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ptch2O35595 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ptch2O35595 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ptch2O35595 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Ptch2O35595 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ptch2O35595 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC20.53■□□□□ 0.88
Ptch2O35595 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ptch2O35595 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.53■□□□□ 0.88
Ptch2O35595 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ptch2O35595 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ptch2O35595 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Ptch2O35595 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Ptch2O35595 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Ptch2O35595 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Ptch2O35595 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Ptch2O35595 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.52■□□□□ 0.88
Ptch2O35595 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ptch2O35595 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ptch2O35595 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ptch2O35595 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ptch2O35595 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Ptch2O35595 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC20.51■□□□□ 0.87
Ptch2O35595 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Ptch2O35595 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Ptch2O35595 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC20.51■□□□□ 0.87
Ptch2O35595 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC20.51■□□□□ 0.87
Ptch2O35595 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Ptch2O35595 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC20.51■□□□□ 0.87
Ptch2O35595 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Ptch2O35595 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ptch2O35595 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ptch2O35595 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Ptch2O35595 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ptch2O35595 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Ptch2O35595 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC20.5■□□□□ 0.87
Ptch2O35595 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Ptch2O35595 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC20.5■□□□□ 0.87
Ptch2O35595 Gm7291-201ENSMUST00000199147 382 ntBASIC20.5■□□□□ 0.87
Ptch2O35595 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ptch2O35595 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ptch2O35595 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ptch2O35595 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.5■□□□□ 0.87
Ptch2O35595 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.49■□□□□ 0.87
Ptch2O35595 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
Ptch2O35595 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ptch2O35595 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC20.49■□□□□ 0.87
Ptch2O35595 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ptch2O35595 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ptch2O35595 AC099934.2-201ENSMUST00000196389 70 ntBASIC20.48■□□□□ 0.87
Ptch2O35595 AC156953.1-201ENSMUST00000196953 70 ntBASIC20.48■□□□□ 0.87
Ptch2O35595 AC157822.2-201ENSMUST00000200291 70 ntBASIC20.48■□□□□ 0.87
Ptch2O35595 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC20.48■□□□□ 0.87
Ptch2O35595 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ptch2O35595 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ptch2O35595 Gm10129-202ENSMUST00000193100 1316 ntBASIC20.48■□□□□ 0.87
Ptch2O35595 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.48■□□□□ 0.87
Ptch2O35595 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Ptch2O35595 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Ptch2O35595 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ptch2O35595 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ptch2O35595 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.47■□□□□ 0.87
Ptch2O35595 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ptch2O35595 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC20.47■□□□□ 0.87
Ptch2O35595 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Ptch2O35595 Gm42569-201ENSMUST00000200539 472 ntBASIC20.47■□□□□ 0.87
Ptch2O35595 Gm42642-201ENSMUST00000200683 355 ntBASIC20.47■□□□□ 0.87
Ptch2O35595 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC20.47■□□□□ 0.87
Ptch2O35595 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC20.47■□□□□ 0.87
Ptch2O35595 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Ptch2O35595 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ptch2O35595 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.46■□□□□ 0.87
Ptch2O35595 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms