Protein–RNA interactions for Protein: E9Q5E2

BC005561, cDNA sequence BC005561, mousemouse

Predictions only

Length 1,589 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BC005561E9Q5E2 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC31.45■■■□□ 2.63
BC005561E9Q5E2 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC31.45■■■□□ 2.62
BC005561E9Q5E2 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
BC005561E9Q5E2 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC31.45■■■□□ 2.62
BC005561E9Q5E2 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC31.44■■■□□ 2.62
BC005561E9Q5E2 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC31.44■■■□□ 2.62
BC005561E9Q5E2 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
BC005561E9Q5E2 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
BC005561E9Q5E2 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
BC005561E9Q5E2 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
BC005561E9Q5E2 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
BC005561E9Q5E2 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
BC005561E9Q5E2 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC31.43■■■□□ 2.62
BC005561E9Q5E2 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
BC005561E9Q5E2 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC31.43■■■□□ 2.62
BC005561E9Q5E2 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC31.43■■■□□ 2.62
BC005561E9Q5E2 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC31.43■■■□□ 2.62
BC005561E9Q5E2 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
BC005561E9Q5E2 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC31.43■■■□□ 2.62
BC005561E9Q5E2 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC31.43■■■□□ 2.62
BC005561E9Q5E2 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC31.42■■■□□ 2.62
BC005561E9Q5E2 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
BC005561E9Q5E2 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
BC005561E9Q5E2 Gm22325-201ENSMUST00000158904 308 ntBASIC31.42■■■□□ 2.62
BC005561E9Q5E2 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC31.41■■■□□ 2.62
BC005561E9Q5E2 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
BC005561E9Q5E2 H3f3aos-201ENSMUST00000097448 2905 ntBASIC31.41■■■□□ 2.62
BC005561E9Q5E2 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
BC005561E9Q5E2 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
BC005561E9Q5E2 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
BC005561E9Q5E2 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC31.41■■■□□ 2.62
BC005561E9Q5E2 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
BC005561E9Q5E2 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
BC005561E9Q5E2 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
BC005561E9Q5E2 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
BC005561E9Q5E2 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
BC005561E9Q5E2 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC31.4■■■□□ 2.62
BC005561E9Q5E2 Gm42418-201ENSMUST00000182010 1831 ntBASIC31.39■■■□□ 2.62
BC005561E9Q5E2 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
BC005561E9Q5E2 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
BC005561E9Q5E2 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
BC005561E9Q5E2 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
BC005561E9Q5E2 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
BC005561E9Q5E2 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.61
BC005561E9Q5E2 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
BC005561E9Q5E2 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC31.38■■■□□ 2.61
BC005561E9Q5E2 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
BC005561E9Q5E2 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC31.38■■■□□ 2.61
BC005561E9Q5E2 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC31.38■■■□□ 2.61
BC005561E9Q5E2 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
BC005561E9Q5E2 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
BC005561E9Q5E2 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
BC005561E9Q5E2 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC31.37■■■□□ 2.61
BC005561E9Q5E2 AC164883.3-201ENSMUST00000227396 1774 ntBASIC31.37■■■□□ 2.61
BC005561E9Q5E2 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
BC005561E9Q5E2 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
BC005561E9Q5E2 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC31.35■■■□□ 2.61
BC005561E9Q5E2 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC31.35■■■□□ 2.61
BC005561E9Q5E2 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
BC005561E9Q5E2 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
BC005561E9Q5E2 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
BC005561E9Q5E2 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC31.35■■■□□ 2.61
BC005561E9Q5E2 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
BC005561E9Q5E2 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC31.34■■■□□ 2.61
BC005561E9Q5E2 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
BC005561E9Q5E2 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
BC005561E9Q5E2 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC31.34■■■□□ 2.61
BC005561E9Q5E2 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
BC005561E9Q5E2 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC31.34■■■□□ 2.61
BC005561E9Q5E2 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC31.34■■■□□ 2.61
BC005561E9Q5E2 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC31.34■■■□□ 2.61
BC005561E9Q5E2 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
BC005561E9Q5E2 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC31.33■■■□□ 2.61
BC005561E9Q5E2 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC31.33■■■□□ 2.61
BC005561E9Q5E2 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
BC005561E9Q5E2 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC31.32■■■□□ 2.6
BC005561E9Q5E2 Gm8520-201ENSMUST00000186517 868 ntBASIC31.32■■■□□ 2.6
BC005561E9Q5E2 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC31.32■■■□□ 2.6
BC005561E9Q5E2 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC31.32■■■□□ 2.6
BC005561E9Q5E2 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
BC005561E9Q5E2 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
BC005561E9Q5E2 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC31.31■■■□□ 2.6
BC005561E9Q5E2 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
BC005561E9Q5E2 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
BC005561E9Q5E2 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
BC005561E9Q5E2 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
BC005561E9Q5E2 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
BC005561E9Q5E2 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC31.31■■■□□ 2.6
BC005561E9Q5E2 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
BC005561E9Q5E2 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC31.3■■■□□ 2.6
BC005561E9Q5E2 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC31.3■■■□□ 2.6
BC005561E9Q5E2 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
BC005561E9Q5E2 CT030146.1-201ENSMUST00000220919 217 ntBASIC31.3■■■□□ 2.6
BC005561E9Q5E2 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC31.3■■■□□ 2.6
BC005561E9Q5E2 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
BC005561E9Q5E2 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
BC005561E9Q5E2 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC31.3■■■□□ 2.6
BC005561E9Q5E2 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC31.3■■■□□ 2.6
BC005561E9Q5E2 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
BC005561E9Q5E2 Gm13168-201ENSMUST00000121771 632 ntBASIC31.29■■■□□ 2.6
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms