Protein–RNA interactions for Protein: E9PY46

Ift140, Intraflagellar transport protein 140 homolog, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift140E9PY46 Gm5075-201ENSMUST00000196916 622 ntBASIC32.51■■■□□ 2.79
Ift140E9PY46 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC32.51■■■□□ 2.79
Ift140E9PY46 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC32.51■■■□□ 2.79
Ift140E9PY46 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC32.51■■■□□ 2.79
Ift140E9PY46 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC32.51■■■□□ 2.79
Ift140E9PY46 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
Ift140E9PY46 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC32.5■■■□□ 2.79
Ift140E9PY46 Gm13146-201ENSMUST00000118508 780 ntBASIC32.5■■■□□ 2.79
Ift140E9PY46 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC32.5■■■□□ 2.79
Ift140E9PY46 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
Ift140E9PY46 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
Ift140E9PY46 Gm5408-201ENSMUST00000197998 747 ntBASIC32.49■■■□□ 2.79
Ift140E9PY46 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
Ift140E9PY46 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
Ift140E9PY46 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC32.49■■■□□ 2.79
Ift140E9PY46 AC164883.3-201ENSMUST00000227396 1774 ntBASIC32.49■■■□□ 2.79
Ift140E9PY46 AC153890.1-201ENSMUST00000220021 2469 ntBASIC32.48■■■□□ 2.79
Ift140E9PY46 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC32.48■■■□□ 2.79
Ift140E9PY46 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC32.48■■■□□ 2.79
Ift140E9PY46 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
Ift140E9PY46 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
Ift140E9PY46 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC32.48■■■□□ 2.79
Ift140E9PY46 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC32.48■■■□□ 2.79
Ift140E9PY46 AC135637.1-201ENSMUST00000227750 365 ntBASIC32.48■■■□□ 2.79
Ift140E9PY46 Gm10812-201ENSMUST00000099864 546 ntBASIC32.48■■■□□ 2.79
Ift140E9PY46 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
Ift140E9PY46 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC32.47■■■□□ 2.79
Ift140E9PY46 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC32.47■■■□□ 2.79
Ift140E9PY46 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
Ift140E9PY46 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
Ift140E9PY46 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC32.47■■■□□ 2.79
Ift140E9PY46 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
Ift140E9PY46 Gm29241-201ENSMUST00000189260 1096 ntBASIC32.46■■■□□ 2.79
Ift140E9PY46 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
Ift140E9PY46 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC32.45■■■□□ 2.79
Ift140E9PY46 Gm37856-201ENSMUST00000191634 999 ntBASIC32.45■■■□□ 2.79
Ift140E9PY46 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC32.45■■■□□ 2.79
Ift140E9PY46 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC32.45■■■□□ 2.79
Ift140E9PY46 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
Ift140E9PY46 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC32.44■■■□□ 2.78
Ift140E9PY46 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC32.44■■■□□ 2.78
Ift140E9PY46 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC32.44■■■□□ 2.78
Ift140E9PY46 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC32.44■■■□□ 2.78
Ift140E9PY46 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
Ift140E9PY46 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC32.43■■■□□ 2.78
Ift140E9PY46 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
Ift140E9PY46 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
Ift140E9PY46 Gm10571-201ENSMUST00000097869 1638 ntBASIC32.43■■■□□ 2.78
Ift140E9PY46 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
Ift140E9PY46 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC32.42■■■□□ 2.78
Ift140E9PY46 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC32.42■■■□□ 2.78
Ift140E9PY46 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC32.42■■■□□ 2.78
Ift140E9PY46 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
Ift140E9PY46 Gm42418-201ENSMUST00000182010 1831 ntBASIC32.42■■■□□ 2.78
Ift140E9PY46 Mir6236-201ENSMUST00000184437 123 ntBASIC32.42■■■□□ 2.78
Ift140E9PY46 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC32.42■■■□□ 2.78
Ift140E9PY46 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC32.42■■■□□ 2.78
Ift140E9PY46 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC32.42■■■□□ 2.78
Ift140E9PY46 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
Ift140E9PY46 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC32.41■■■□□ 2.78
Ift140E9PY46 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
Ift140E9PY46 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
Ift140E9PY46 AC135963.1-201ENSMUST00000211640 717 ntBASIC32.41■■■□□ 2.78
Ift140E9PY46 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC32.4■■■□□ 2.78
Ift140E9PY46 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
Ift140E9PY46 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC32.4■■■□□ 2.78
Ift140E9PY46 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC32.39■■■□□ 2.78
Ift140E9PY46 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC32.39■■■□□ 2.78
Ift140E9PY46 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC32.39■■■□□ 2.78
Ift140E9PY46 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC32.39■■■□□ 2.77
Ift140E9PY46 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
Ift140E9PY46 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
Ift140E9PY46 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC32.38■■■□□ 2.77
Ift140E9PY46 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC32.37■■■□□ 2.77
Ift140E9PY46 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
Ift140E9PY46 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC32.37■■■□□ 2.77
Ift140E9PY46 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC32.37■■■□□ 2.77
Ift140E9PY46 CT010467.1-202ENSMUST00000205406 714 ntBASIC32.36■■■□□ 2.77
Ift140E9PY46 AC122769.4-201ENSMUST00000228166 901 ntBASIC32.36■■■□□ 2.77
Ift140E9PY46 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
Ift140E9PY46 Gm13181-201ENSMUST00000120117 1069 ntBASIC32.35■■■□□ 2.77
Ift140E9PY46 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC32.35■■■□□ 2.77
Ift140E9PY46 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC32.35■■■□□ 2.77
Ift140E9PY46 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC32.35■■■□□ 2.77
Ift140E9PY46 Gm6211-202ENSMUST00000167849 925 ntBASIC32.35■■■□□ 2.77
Ift140E9PY46 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
Ift140E9PY46 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
Ift140E9PY46 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
Ift140E9PY46 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC32.34■■■□□ 2.77
Ift140E9PY46 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
Ift140E9PY46 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC32.34■■■□□ 2.77
Ift140E9PY46 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
Ift140E9PY46 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
Ift140E9PY46 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC32.33■■■□□ 2.77
Ift140E9PY46 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
Ift140E9PY46 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC32.33■■■□□ 2.77
Ift140E9PY46 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC32.32■■■□□ 2.76
Ift140E9PY46 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
Ift140E9PY46 Mir6982-201ENSMUST00000184354 68 ntBASIC32.32■■■□□ 2.76
Ift140E9PY46 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC32.32■■■□□ 2.76
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms