Protein–RNA interactions for Protein: A0A087WRT7

Ms4a4a, Membrane-spanning 4-domains, subfamily A, member 4A, mousemouse

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ms4a4aA0A087WRT7 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Ms4a4aA0A087WRT7 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC22.18■■□□□ 1.14
Ms4a4aA0A087WRT7 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Ms4a4aA0A087WRT7 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
Ms4a4aA0A087WRT7 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
Ms4a4aA0A087WRT7 Gm42418-201ENSMUST00000182010 1831 ntBASIC22.17■■□□□ 1.14
Ms4a4aA0A087WRT7 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Ms4a4aA0A087WRT7 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC22.17■■□□□ 1.14
Ms4a4aA0A087WRT7 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Ms4a4aA0A087WRT7 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Ms4a4aA0A087WRT7 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Ms4a4aA0A087WRT7 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Ms4a4aA0A087WRT7 Gm8520-201ENSMUST00000186517 868 ntBASIC22.16■■□□□ 1.14
Ms4a4aA0A087WRT7 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Ms4a4aA0A087WRT7 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Ms4a4aA0A087WRT7 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ms4a4aA0A087WRT7 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Ms4a4aA0A087WRT7 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ms4a4aA0A087WRT7 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ms4a4aA0A087WRT7 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
Ms4a4aA0A087WRT7 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
Ms4a4aA0A087WRT7 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Ms4a4aA0A087WRT7 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC22.14■■□□□ 1.14
Ms4a4aA0A087WRT7 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Ms4a4aA0A087WRT7 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC22.14■■□□□ 1.13
Ms4a4aA0A087WRT7 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Ms4a4aA0A087WRT7 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC22.14■■□□□ 1.13
Ms4a4aA0A087WRT7 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ms4a4aA0A087WRT7 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ms4a4aA0A087WRT7 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Ms4a4aA0A087WRT7 Gm22325-201ENSMUST00000158904 308 ntBASIC22.13■■□□□ 1.13
Ms4a4aA0A087WRT7 Mir6236-201ENSMUST00000184437 123 ntBASIC22.13■■□□□ 1.13
Ms4a4aA0A087WRT7 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC22.13■■□□□ 1.13
Ms4a4aA0A087WRT7 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Ms4a4aA0A087WRT7 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Ms4a4aA0A087WRT7 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Ms4a4aA0A087WRT7 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ms4a4aA0A087WRT7 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ms4a4aA0A087WRT7 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
Ms4a4aA0A087WRT7 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
Ms4a4aA0A087WRT7 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Ms4a4aA0A087WRT7 Mir7071-201ENSMUST00000184847 69 ntBASIC22.12■■□□□ 1.13
Ms4a4aA0A087WRT7 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC22.12■■□□□ 1.13
Ms4a4aA0A087WRT7 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ms4a4aA0A087WRT7 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ms4a4aA0A087WRT7 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ms4a4aA0A087WRT7 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
Ms4a4aA0A087WRT7 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ms4a4aA0A087WRT7 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ms4a4aA0A087WRT7 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Ms4a4aA0A087WRT7 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC22.11■■□□□ 1.13
Ms4a4aA0A087WRT7 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ms4a4aA0A087WRT7 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ms4a4aA0A087WRT7 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ms4a4aA0A087WRT7 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Ms4a4aA0A087WRT7 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ms4a4aA0A087WRT7 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ms4a4aA0A087WRT7 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ms4a4aA0A087WRT7 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC22.09■■□□□ 1.13
Ms4a4aA0A087WRT7 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ms4a4aA0A087WRT7 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ms4a4aA0A087WRT7 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Ms4a4aA0A087WRT7 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ms4a4aA0A087WRT7 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Ms4a4aA0A087WRT7 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Ms4a4aA0A087WRT7 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.13
Ms4a4aA0A087WRT7 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Ms4a4aA0A087WRT7 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Ms4a4aA0A087WRT7 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
Ms4a4aA0A087WRT7 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Ms4a4aA0A087WRT7 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Ms4a4aA0A087WRT7 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ms4a4aA0A087WRT7 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC22.07■■□□□ 1.12
Ms4a4aA0A087WRT7 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ms4a4aA0A087WRT7 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ms4a4aA0A087WRT7 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
Ms4a4aA0A087WRT7 Gm13148-201ENSMUST00000118892 745 ntBASIC22.07■■□□□ 1.12
Ms4a4aA0A087WRT7 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Ms4a4aA0A087WRT7 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC22.07■■□□□ 1.12
Ms4a4aA0A087WRT7 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ms4a4aA0A087WRT7 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ms4a4aA0A087WRT7 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Ms4a4aA0A087WRT7 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
Ms4a4aA0A087WRT7 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ms4a4aA0A087WRT7 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ms4a4aA0A087WRT7 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ms4a4aA0A087WRT7 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ms4a4aA0A087WRT7 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Ms4a4aA0A087WRT7 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
Ms4a4aA0A087WRT7 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ms4a4aA0A087WRT7 Gm43859-201ENSMUST00000200075 1412 ntBASIC22.06■■□□□ 1.12
Ms4a4aA0A087WRT7 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ms4a4aA0A087WRT7 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Ms4a4aA0A087WRT7 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Ms4a4aA0A087WRT7 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
Ms4a4aA0A087WRT7 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
Ms4a4aA0A087WRT7 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Ms4a4aA0A087WRT7 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC22.05■■□□□ 1.12
Ms4a4aA0A087WRT7 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Ms4a4aA0A087WRT7 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC22.05■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms