Protein–RNA interactions for Protein: A0A075B6A6

Trav6n-7, T cell receptor alpha variable 6N-7 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-7A0A075B6A6 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav6n-7A0A075B6A6 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav6n-7A0A075B6A6 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav6n-7A0A075B6A6 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trav6n-7A0A075B6A6 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Trav6n-7A0A075B6A6 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trav6n-7A0A075B6A6 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trav6n-7A0A075B6A6 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav6n-7A0A075B6A6 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav6n-7A0A075B6A6 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav6n-7A0A075B6A6 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav6n-7A0A075B6A6 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav6n-7A0A075B6A6 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Trav6n-7A0A075B6A6 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trav6n-7A0A075B6A6 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC16.99■□□□□ 0.31
Trav6n-7A0A075B6A6 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trav6n-7A0A075B6A6 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav6n-7A0A075B6A6 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav6n-7A0A075B6A6 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC16.99■□□□□ 0.31
Trav6n-7A0A075B6A6 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trav6n-7A0A075B6A6 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav6n-7A0A075B6A6 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Trav6n-7A0A075B6A6 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav6n-7A0A075B6A6 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav6n-7A0A075B6A6 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav6n-7A0A075B6A6 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav6n-7A0A075B6A6 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav6n-7A0A075B6A6 Mir6236-201ENSMUST00000184437 123 ntBASIC16.98■□□□□ 0.31
Trav6n-7A0A075B6A6 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trav6n-7A0A075B6A6 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav6n-7A0A075B6A6 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trav6n-7A0A075B6A6 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trav6n-7A0A075B6A6 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav6n-7A0A075B6A6 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav6n-7A0A075B6A6 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav6n-7A0A075B6A6 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav6n-7A0A075B6A6 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav6n-7A0A075B6A6 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC16.97■□□□□ 0.31
Trav6n-7A0A075B6A6 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trav6n-7A0A075B6A6 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC16.97■□□□□ 0.31
Trav6n-7A0A075B6A6 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trav6n-7A0A075B6A6 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC16.96■□□□□ 0.31
Trav6n-7A0A075B6A6 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav6n-7A0A075B6A6 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav6n-7A0A075B6A6 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav6n-7A0A075B6A6 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trav6n-7A0A075B6A6 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav6n-7A0A075B6A6 AC152827.1-201ENSMUST00000221143 2189 ntBASIC16.96■□□□□ 0.31
Trav6n-7A0A075B6A6 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Trav6n-7A0A075B6A6 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav6n-7A0A075B6A6 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav6n-7A0A075B6A6 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav6n-7A0A075B6A6 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav6n-7A0A075B6A6 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trav6n-7A0A075B6A6 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav6n-7A0A075B6A6 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC16.95■□□□□ 0.3
Trav6n-7A0A075B6A6 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav6n-7A0A075B6A6 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav6n-7A0A075B6A6 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav6n-7A0A075B6A6 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC16.95■□□□□ 0.3
Trav6n-7A0A075B6A6 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav6n-7A0A075B6A6 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav6n-7A0A075B6A6 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trav6n-7A0A075B6A6 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trav6n-7A0A075B6A6 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trav6n-7A0A075B6A6 Gm37035-201ENSMUST00000194809 2148 ntBASIC16.94■□□□□ 0.3
Trav6n-7A0A075B6A6 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav6n-7A0A075B6A6 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trav6n-7A0A075B6A6 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav6n-7A0A075B6A6 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav6n-7A0A075B6A6 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav6n-7A0A075B6A6 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav6n-7A0A075B6A6 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav6n-7A0A075B6A6 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
Trav6n-7A0A075B6A6 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav6n-7A0A075B6A6 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trav6n-7A0A075B6A6 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav6n-7A0A075B6A6 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav6n-7A0A075B6A6 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Trav6n-7A0A075B6A6 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav6n-7A0A075B6A6 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Trav6n-7A0A075B6A6 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav6n-7A0A075B6A6 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav6n-7A0A075B6A6 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trav6n-7A0A075B6A6 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav6n-7A0A075B6A6 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC16.92■□□□□ 0.3
Trav6n-7A0A075B6A6 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC16.92■□□□□ 0.3
Trav6n-7A0A075B6A6 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trav6n-7A0A075B6A6 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav6n-7A0A075B6A6 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav6n-7A0A075B6A6 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav6n-7A0A075B6A6 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav6n-7A0A075B6A6 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav6n-7A0A075B6A6 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Trav6n-7A0A075B6A6 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Trav6n-7A0A075B6A6 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
Trav6n-7A0A075B6A6 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC16.91■□□□□ 0.3
Trav6n-7A0A075B6A6 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trav6n-7A0A075B6A6 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC16.91■□□□□ 0.3
Trav6n-7A0A075B6A6 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms