Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Cit-212ENSMUST00000141101 6794 ntTSL 5 BASIC12.11□□□□□ -0.47
Smc1aQ9CU62 Oxsm-201ENSMUST00000022311 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smc1aQ9CU62 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smc1aQ9CU62 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Smc1aQ9CU62 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smc1aQ9CU62 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smc1aQ9CU62 Dhcr7-211ENSMUST00000207143 1652 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Smc1aQ9CU62 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Smc1aQ9CU62 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smc1aQ9CU62 Gm16219-201ENSMUST00000120096 274 ntBASIC12.11□□□□□ -0.47
Smc1aQ9CU62 Gm15549-201ENSMUST00000121595 622 ntBASIC12.11□□□□□ -0.47
Smc1aQ9CU62 Gm5257-201ENSMUST00000121823 790 ntBASIC12.11□□□□□ -0.47
Smc1aQ9CU62 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smc1aQ9CU62 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC12.11□□□□□ -0.47
Smc1aQ9CU62 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC12.11□□□□□ -0.47
Smc1aQ9CU62 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC12.11□□□□□ -0.47
Smc1aQ9CU62 Gm8723-201ENSMUST00000166076 820 ntBASIC12.11□□□□□ -0.47
Smc1aQ9CU62 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Smc1aQ9CU62 Gm8701-201ENSMUST00000169259 874 ntBASIC12.11□□□□□ -0.47
Smc1aQ9CU62 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Smc1aQ9CU62 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC12.11□□□□□ -0.47
Smc1aQ9CU62 Gm28833-201ENSMUST00000189671 559 ntBASIC12.11□□□□□ -0.47
Smc1aQ9CU62 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Smc1aQ9CU62 Gm43778-201ENSMUST00000199438 199 ntBASIC12.11□□□□□ -0.47
Smc1aQ9CU62 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Smc1aQ9CU62 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Smc1aQ9CU62 Gm45592-201ENSMUST00000209605 1043 ntBASIC12.11□□□□□ -0.47
Smc1aQ9CU62 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC12.11□□□□□ -0.47
Smc1aQ9CU62 AC154361.2-201ENSMUST00000224747 943 ntBASIC12.11□□□□□ -0.47
Smc1aQ9CU62 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Smc1aQ9CU62 Gm45041-201ENSMUST00000207366 3108 ntBASIC12.11□□□□□ -0.47
Smc1aQ9CU62 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smc1aQ9CU62 2810032G03Rik-202ENSMUST00000163627 2514 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Smc1aQ9CU62 Gpatch2-204ENSMUST00000110943 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smc1aQ9CU62 Gm18294-201ENSMUST00000176980 1748 ntBASIC12.11□□□□□ -0.47
Smc1aQ9CU62 Oas1h-201ENSMUST00000072476 1703 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smc1aQ9CU62 Gimap8-202ENSMUST00000203083 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smc1aQ9CU62 Aldh1a3-201ENSMUST00000015278 3443 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smc1aQ9CU62 Gm44056-201ENSMUST00000204623 1427 ntBASIC12.11□□□□□ -0.47
Smc1aQ9CU62 Cutal-203ENSMUST00000113068 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smc1aQ9CU62 Zbtb21-202ENSMUST00000063605 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smc1aQ9CU62 Sirpa-204ENSMUST00000103203 3674 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
Smc1aQ9CU62 Astn1-205ENSMUST00000193042 7248 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smc1aQ9CU62 Supt16-201ENSMUST00000046709 4673 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smc1aQ9CU62 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smc1aQ9CU62 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC12.1□□□□□ -0.47
Smc1aQ9CU62 Nfya-201ENSMUST00000046719 3645 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smc1aQ9CU62 Pak7-201ENSMUST00000035264 4848 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smc1aQ9CU62 Fbxl18-202ENSMUST00000110766 7857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smc1aQ9CU62 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC12.1□□□□□ -0.47
Smc1aQ9CU62 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Smc1aQ9CU62 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Smc1aQ9CU62 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smc1aQ9CU62 Meox2-201ENSMUST00000041183 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smc1aQ9CU62 AC167565.1-201ENSMUST00000226980 1833 ntBASIC12.1□□□□□ -0.47
Smc1aQ9CU62 Gm25053-201ENSMUST00000103982 133 ntBASIC12.1□□□□□ -0.47
Smc1aQ9CU62 Gm25922-201ENSMUST00000104281 130 ntBASIC12.1□□□□□ -0.47
Smc1aQ9CU62 Gm4294-201ENSMUST00000105169 614 ntBASIC12.1□□□□□ -0.47
Smc1aQ9CU62 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Smc1aQ9CU62 Gm11560-201ENSMUST00000117567 948 ntBASIC12.1□□□□□ -0.47
Smc1aQ9CU62 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smc1aQ9CU62 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smc1aQ9CU62 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC12.1□□□□□ -0.47
Smc1aQ9CU62 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Smc1aQ9CU62 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Smc1aQ9CU62 Gm24248-201ENSMUST00000157321 322 ntBASIC12.1□□□□□ -0.47
Smc1aQ9CU62 Gm24679-201ENSMUST00000158762 111 ntBASIC12.1□□□□□ -0.47
Smc1aQ9CU62 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Smc1aQ9CU62 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC12.1□□□□□ -0.47
Smc1aQ9CU62 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Smc1aQ9CU62 Gm25053-202ENSMUST00000199731 132 ntBASIC12.1□□□□□ -0.47
Smc1aQ9CU62 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC12.1□□□□□ -0.47
Smc1aQ9CU62 Gm6423-201ENSMUST00000204315 934 ntBASIC12.1□□□□□ -0.47
Smc1aQ9CU62 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Smc1aQ9CU62 Gm7082-201ENSMUST00000209880 969 ntBASIC12.1□□□□□ -0.47
Smc1aQ9CU62 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC12.1□□□□□ -0.47
Smc1aQ9CU62 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC12.1□□□□□ -0.47
Smc1aQ9CU62 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Smc1aQ9CU62 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smc1aQ9CU62 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Smc1aQ9CU62 Stard4-201ENSMUST00000025236 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smc1aQ9CU62 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smc1aQ9CU62 Inpp4a-202ENSMUST00000058307 2963 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Smc1aQ9CU62 Fam47e-202ENSMUST00000131166 1500 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Smc1aQ9CU62 Itgal-205ENSMUST00000170971 3662 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Smc1aQ9CU62 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smc1aQ9CU62 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Smc1aQ9CU62 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smc1aQ9CU62 Mindy4-201ENSMUST00000053094 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smc1aQ9CU62 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC12.1□□□□□ -0.47
Smc1aQ9CU62 Ifit1bl1-202ENSMUST00000168254 2215 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
Smc1aQ9CU62 Gm10827-201ENSMUST00000181897 2586 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Smc1aQ9CU62 Tnfsf13b-203ENSMUST00000207792 4771 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smc1aQ9CU62 Srp54a-207ENSMUST00000110708 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smc1aQ9CU62 Myh9-201ENSMUST00000016771 7433 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smc1aQ9CU62 Gm9415-201ENSMUST00000200462 1321 ntBASIC12.1□□□□□ -0.47
Smc1aQ9CU62 Gm8899-201ENSMUST00000214635 1332 ntBASIC12.1□□□□□ -0.47
Smc1aQ9CU62 Llph-201ENSMUST00000020444 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smc1aQ9CU62 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smc1aQ9CU62 Lcorl-205ENSMUST00000121573 2378 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms